RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 SLC40A1Q9NP59 571 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 IL26Q9NPH9 171 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 SIDT1Q9NXL6 827 aaKnown RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 KLHL8Q9P2G9 620 aaPredicted RBP18.45■□□□□ 0.54
CPSF2-203ENST00000554290 IL17BQ9UHF5 180 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 TUBD1Q9UJT1 453 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 TMPRSS11EQ9UL52 423 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 SLC30A1Q9Y6M5 507 aa18.45■□□□□ 0.54
CPSF2-203ENST00000554290 NKX2-8O15522 239 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 RASSF9O75901 435 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 ZRANB2O95218 330 aaKnown RBP eCLIP18.44■□□□□ 0.54
CPSF2-203ENST00000554290 BRAFP15056 766 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 DRG2P55039 364 aaKnown RBP18.44■□□□□ 0.54
CPSF2-203ENST00000554290 POLE2P56282 527 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 KCNAB2Q13303 367 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 MAP7Q14244 749 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 SIRPB2Q5JXA9 342 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 LDLRAP1Q5SW96 308 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 KDELC1Q6UW63 502 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 UNC5BQ8IZJ1 945 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 TTC30BQ8N4P2 665 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 ZDHHC12Q96GR4 267 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 FCRL5Q96RD9 977 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 ULBP3Q9BZM4 244 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 ZNF768Q9H5H4 540 aaKnown RBP18.44■□□□□ 0.54
CPSF2-203ENST00000554290 IL17CQ9P0M4 197 aa18.44■□□□□ 0.54
CPSF2-203ENST00000554290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.44■□□□□ 0.54
CPSF2-203ENST00000554290 OR52A4PA6NMU1 304 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 TERTO14746 1132 aaKnown RBP18.43■□□□□ 0.54
CPSF2-203ENST00000554290 DLGAP3O95886 979 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 HLA-DPA1P20036 260 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 SPAM1P38567 509 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 MAGEA1P43355 309 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 SEPHS1P49903 392 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 CDC20Q12834 499 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 GPR18Q14330 331 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 IL11RAQ14626 422 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 LLGL1Q15334 1064 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 PPP2R5EQ16537 467 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 GLT6D1Q7Z4J2 308 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 AMZ2Q86W34 360 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 CCDC50Q8IVM0 306 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 KATNAL2Q8IYT4 538 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 SLC25A41Q8N5S1 370 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 TRIM4Q9C037 500 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 TRIM10Q9UDY6 481 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 PKP3Q9Y446 797 aa18.43■□□□□ 0.54
CPSF2-203ENST00000554290 hCG_1818297A0A087WSY0 165 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 HACD1B0YJ81 288 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 PRKAR1AP10644 381 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 STAT5AP42229 794 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 CHRNA4P43681 627 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 CAPZBP47756 277 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 LEPRP48357 1165 aaKnown RBP18.42■□□□□ 0.54
CPSF2-203ENST00000554290 MPP3Q13368 585 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 ITGA9Q13797 1035 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 NOMO1Q15155 1222 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 SLC1A5Q15758 541 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 CYB5D1Q6P9G0 228 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 IPMKQ8NFU5 416 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 BLOC1S5Q8TDH9 187 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 STARD8Q92502 1023 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 RBM41Q96IZ5 413 aaKnown RBP18.42■□□□□ 0.54
CPSF2-203ENST00000554290 MRGPRX2Q96LB1 330 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 OR6C1Q96RD1 312 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 FSD1LQ9BXM9 530 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 EPHA6Q9UF33 1036 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 DNMT3AQ9Y6K1 912 aaPredicted RBP18.42■□□□□ 0.54
CPSF2-203ENST00000554290 RPS6KL1Q9Y6S9 549 aa18.42■□□□□ 0.54
CPSF2-203ENST00000554290 GLYATL1P3A0A0U1RQE8 302 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A9O60656 530 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 POP7O75817 140 aaKnown RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A6P19224 532 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 TCN2P20062 427 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A1P22309 533 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A4P22310 534 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 TBX2Q13207 712 aaPredicted RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 CHRNA6Q15825 494 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 CRTC2Q53ET0 693 aaPredicted RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 CACHD1Q5VU97 1274 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 IRGCQ6NXR0 463 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 KLHL35Q6PF15 583 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 C6orf15Q6UXA7 325 aaPredicted RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 FAM151BQ6UXP7 276 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 PRSS42Q7Z5A4 293 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 RASGRP3Q8IV61 690 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 DDHD1Q8NEL9 900 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 APOBEC4Q8WW27 367 aaKnown RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 RSC1A1Q92681 617 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 HAUS1Q96CS2 278 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 OXNAD1Q96HP4 312 aaPredicted RBP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 QKIQ96PU8 341 aaKnown RBP eCLIP18.41■□□□□ 0.54
CPSF2-203ENST00000554290 FERMT1Q9BQL6 677 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 RAB33BQ9H082 229 aa18.41■□□□□ 0.54
CPSF2-203ENST00000554290 UGT1A7Q9HAW7 530 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms