RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 GSTA2P09210 222 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 CD59P13987 128 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 ATP1B2P14415 290 aaPredicted RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 RPS3P23396 243 aaKnown RBP eCLIP14.63□□□□□ -0.073e-9■■□□□ 11.7
MTHFD1-204ENST00000553405 NSG1P42857 185 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 GNPDA1P46926 289 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 ARRB1P49407 418 aaPredicted RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 TTPAP49638 278 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 PRLHRP49683 370 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 CCT8P50990 548 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 ADARP55265 1226 aaKnown RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 HNRNPKP61978 463 aaKnown RBP eCLIP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 MPP1Q00013 466 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 IL9RQ01113 521 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 CTBSQ01459 385 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 CTBP1Q13363 440 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 KYNUQ16719 465 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 AARS2Q5JTZ9 985 aaKnown RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 CTSL3PQ5NE16 218 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 LYPLAL1Q5VWZ2 237 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 MRNIPQ6NTE8 343 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 RD3Q7Z3Z2 195 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 GALNT7Q86SF2 657 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 GDAP1Q8TB36 358 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 HEXDCQ8WVB3 486 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 OR2M4Q96R27 311 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 ZCCHC2Q9C0B9 1178 aaKnown RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 TSPYL1Q9H0U9 437 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 TMEM9BQ9NQ34 198 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 FBXO5Q9UKT4 447 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 RAB21Q9UL25 225 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 MED16Q9Y2X0 877 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 PSAT1Q9Y617 370 aa14.63□□□□□ -0.07
MTHFD1-204ENST00000553405 A6NCN8 305 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 OR2AG2A6NM03 316 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 CXorf49A8MYA2 514 aaPredicted RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 LMO7DNF2Z398 122 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 YKT6O15498 198 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 PIAS1O75925 651 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 AP2A2O94973 939 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 TNFP01375 233 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 MSH3P20585 1137 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 AKT1P31749 480 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 PLA2G5P39877 138 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 LEPRP48357 1165 aaKnown RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 BLKP51451 505 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 CLCNKAP51800 687 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 LIMK1P53667 647 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 TIAL1Q01085 375 aaKnown RBP eCLIP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 DMPKQ09013 629 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 C1orf61Q13536 156 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 PRRT3Q5FWE3 981 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 ZNF549Q6P9A3 640 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 C3orf62Q6ZUJ4 267 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 DET1Q7L5Y6 550 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 LRRTM4Q86VH4 590 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 GATAD2AQ86YP4 633 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 GALNT13Q8IUC8 556 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 GPR161Q8N6U8 529 aaKnown RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 BEND7Q8N7W2 519 aaPredicted RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 LKAAEAR1Q8TD35 194 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 UBXN4Q92575 508 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 ZNF514Q96K75 400 aaPredicted RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 TIMM29Q9BSF4 260 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 FAM167BQ9BTA0 163 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 INTS10Q9NVR2 710 aaKnown RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 BTBD3Q9Y2F9 522 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 CSNK1G3Q9Y6M4 447 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 DCHS1Q96JQ0 3298 aa14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 ARHGEF17Q96PE2 2063 aaPredicted RBP14.62□□□□□ -0.07
MTHFD1-204ENST00000553405 C4orf47A7E2U8 309 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 PRMT5O14744 637 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 TM4SF5O14894 197 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 YY2O15391 372 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 AQP9O43315 295 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 AHSGP02765 367 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 ZNF7P17097 686 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 AK4P27144 223 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 MGAT5Q09328 741 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 SLC14A1Q13336 389 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 THOC5Q13769 683 aaKnown RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 LRP8Q14114 963 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 STPG1Q5TH74 334 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 CRTC3Q6UUV7 619 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 FAM83HQ6ZRV2 1179 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 CAPN12Q6ZSI9 719 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 KIAA0408Q6ZU52 694 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 PALM2Q8IXS6 379 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 FSTL5Q8N475 847 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 BAHD1Q8TBE0 780 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 CALML6Q8TD86 181 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 AENQ8WTP8 325 aaKnown RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 SLC13A1Q9BZW2 595 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 FBXO6Q9NRD1 293 aaPredicted RBP14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 SPASTQ9UBP0 616 aa14.61□□□□□ -0.07
MTHFD1-204ENST00000553405 ZNHIT2Q9UHR6 403 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms