RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF669Q96BR6 464 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 SGF29Q96ES7 293 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 LIN37Q96GY3 246 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 FMO2Q99518 471 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 TTC1Q99614 292 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 CCDC3Q9BQI4 270 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 NAT9Q9BTE0 207 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 FOXP3Q9BZS1 431 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 TSPYL1Q9H0U9 437 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 FAM83DQ9H4H8 585 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 SAYSD1Q9NPB0 183 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 DMGDHQ9UI17 866 aaKnown RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 CRLS1Q9UJA2 301 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 APPL1Q9UKG1 709 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 PNMA8BQ9ULN7 279 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 CHMP2BQ9UQN3 213 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 PCDHGA7Q9Y5G6 932 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 BSNQ9UPA5 3926 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 A0A0U1RQS6 177 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PLD2O14939 933 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PFDN6O15212 129 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 AVILO75366 819 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PRAMEF1O95521 474 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 FAM87AP0C7U9 286 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 TSHRP16473 764 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PGAM1P18669 254 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 UGT1A5P35504 534 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 SPINT3P49223 89 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 RPIAP49247 311 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PFN3P60673 137 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PTSQ03393 145 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 THOC5Q13769 683 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PRRT3Q5FWE3 981 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 ZRANB3Q5FWF4 1079 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 TSTD2Q5T7W7 516 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 DENND5AQ6IQ26 1287 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 FAM151BQ6UXP7 276 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 Q6ZVL8 140 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF765Q7L2R6 523 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 B3GNT8Q7Z7M8 397 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 CCNJLQ8IV13 435 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PALM2Q8IXS6 379 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 RAVER1Q8IY67 606 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 FBXO39Q8N4B4 442 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 TTC30BQ8N4P2 665 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 OR13C4Q8NGS5 318 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 FBXO25Q8TCJ0 367 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 BTN2A2Q8WVV5 523 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 GLMNQ92990 594 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 NAT6Q93015 286 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 ART4Q93070 314 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 LRRC39Q96DD0 335 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 DNAJC1Q96KC8 554 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 LENG8Q96PV6 779 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PLEKHG4BQ96PX9 1271 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 RANBP9Q96S59 729 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 ZSCAN5AQ9BUG6 496 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 RIOK2Q9BVS4 552 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 C1QTNF2Q9BXJ5 285 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 CLPBQ9H078 707 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 WDR26Q9H7D7 661 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 SYNDIG1Q9H7V2 258 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 MRM3Q9HC36 420 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PHPT1Q9NRX4 125 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 GRHL1Q9NZI5 618 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 SPASTQ9UBP0 616 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 ZC3H7BQ9UGR2 993 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 APOBEC3BQ9UH17 382 aaKnown RBP11.26□□□□□ -0.61
TMEM116-218ENST00000552839 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 MOSPD1Q9UJG1 213 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PADI4Q9UM07 663 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 RPS6KL1Q9Y6S9 549 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
TMEM116-218ENST00000552839 LRRK1Q38SD2 2015 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 AURKAO14965 403 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 EIF3HO15372 352 aaKnown RBP eCLIP11.25□□□□□ -0.61
TMEM116-218ENST00000552839 YY2O15391 372 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ASMTLO95671 621 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 TTC4O95801 387 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 ITGB2P05107 769 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 HGFP14210 728 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 IVDP26440 423 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 HTR1BP28222 390 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 AKT1P31749 480 aa11.25□□□□□ -0.61
TMEM116-218ENST00000552839 MC4RP32245 332 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms