RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	WDR75	Q8IWA0	830 aa	Known RBP	12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	MYO1H	Q8N1T3	1032 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	IL17RC	Q8NAC3	791 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	HLA-C	Q95604	372 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	GLYATL1	Q969I3	302 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	ERLEC1	Q96DZ1	483 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	L3HYPDH	Q96EM0	354 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	CNDP1	Q96KN2	507 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	RMDN2	Q96LZ7	410 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	TMEM237	Q96Q45	408 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	CDX2	Q99626	313 aa	Predicted RBP	12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	KCTD5	Q9NXV2	234 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	HAO1	Q9UJM8	370 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	DCTN4	Q9UJW0	460 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	RAP2C	Q9Y3L5	183 aa		12.53	□□□□□ -0.4
CACNB3-223	ENST00000552480	SUPT3H	B4E1H0	165 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	UBXN8	O00124	270 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ADAM23	O75077	832 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	SUPT3H	O75486	399 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ASGR2	P07307	311 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	KIT	P10721	976 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	MTHFD2	P13995	350 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	HOXB2	P14652	356 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ALOX15	P16050	662 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	IMPDH1	P20839	514 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	PRKAA1	Q13131	559 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	LEXM	Q3ZCV2	418 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	KIAA1211L	Q6NV74	962 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ADAMTSL2	Q86TH1	951 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	PHYKPL	Q8IUZ5	450 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	HDDC3	Q8N4P3	179 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	CCNYL1	Q8N7R7	359 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	NAT14	Q8WUY8	206 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	CCT6B	Q92526	530 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	EXT2	Q93063	718 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	FUBP1	Q96AE4	644 aa	Known RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	FAM131C	Q96AQ9	280 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	PHF21B	Q96EK2	531 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	KDM4C	Q9H3R0	1056 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	STN1	Q9H668	368 aa	Known RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	CYP4F12	Q9HCS2	524 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	SLC2A4RG	Q9NR83	387 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	ABCF3	Q9NUQ8	709 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	PNPO	Q9NVS9	261 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	MARCO	Q9UEW3	520 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	MYO9B	Q13459	2157 aa		12.52	□□□□□ -0.41
CACNB3-223	ENST00000552480	BPTF	Q12830	3046 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	RANBP2	P49792	3224 aa	Known RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480		A0A1W2PQF6	199 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	KPNA5	O15131	536 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	NARS	O43776	548 aa	Known RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	KLK8	O60259	260 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	SOD1	P00441	154 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	FTH1	P02794	183 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	CHRNG	P07510	517 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	SRF	P11831	508 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ENO3	P13929	434 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	GFAP	P14136	432 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	FOSL2	P15408	326 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	COL9A1	P20849	921 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	AOAH	P28039	575 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	AQP5	P55064	265 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	TAS2R38	P59533	333 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	NAA20	P61599	178 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	HERVK_113	P63132	956 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	GALNT1	Q10472	559 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	GBX1	Q14549	363 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	SETDB1	Q15047	1291 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	HSF5	Q4G112	596 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	FBXO43	Q4G163	708 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	KHDC1	Q4VXA5	237 aa	Known RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ACSBG2	Q5FVE4	666 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ARL13A	Q5H913	290 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZNF678	Q5SXM1	525 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	RAET1G	Q6H3X3	334 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	FRMD7	Q6ZUT3	714 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	DET1	Q7L5Y6	550 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	CACUL1	Q86Y37	369 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	GPSM1	Q86YR5	675 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	LSMEM2	Q8N112	164 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	FBXO39	Q8N4B4	442 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZNF781	Q8N8C0	355 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	TRMO	Q9BU70	441 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ERVK-6	Q9BXR3	956 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	WWP1	Q9H0M0	922 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	GSTO2	Q9H4Y5	243 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	EML4	Q9HC35	981 aa	Known RBP	12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	CD248	Q9HCU0	757 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	DNAJC28	Q9NX36	388 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480	NUDT4	Q9NZJ9	180 aa		12.51	□□□□□ -0.41
CACNB3-223	ENST00000552480		A0A1W2PP55	124 aa		12.5	□□□□□ -0.41
CACNB3-223	ENST00000552480	STX16-NPEPL1	H3BU86	382 aa		12.5	□□□□□ -0.41
CACNB3-223	ENST00000552480	STX16	O14662	325 aa		12.5	□□□□□ -0.41
CACNB3-223	ENST00000552480	INPP4B	O15327	924 aa		12.5	□□□□□ -0.41
CACNB3-223	ENST00000552480	SGTA	O43765	313 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms