RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	NRP2	O60462	931 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TRIM16	O95361	564 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	CHRM1	P11229	460 aa	Predicted RBP	13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TYR	P14679	529 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	HOXA9	P31269	272 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	RGS4	P49798	205 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	SEMG2	Q02383	582 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	DMC1	Q14565	340 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ZNF77	Q15935	545 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	LRRC66	Q68CR7	880 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TRIM68	Q6AZZ1	485 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	SBSN	Q6UWP8	590 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	FRA10AC1	Q70Z53	315 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	DHDDS	Q86SQ9	333 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ZNF557	Q8N988	423 aa	Predicted RBP	13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	OR9I1	Q8NGQ6	314 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TUBGCP3	Q96CW5	907 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ASIC4	Q96FT7	647 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	HTATIP2	Q9BUP3	242 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TMEM106C	Q9BVX2	250 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TBC1D14	Q9P2M4	693 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	PRKAG2	Q9UGJ0	569 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TIMM22	Q9Y584	194 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TRIM38	O00635	465 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	EPCAM	P16422	314 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	DGKA	P23743	735 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	PSMD8	P48556	350 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	NTHL1	P78549	312 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	MS4A2	Q01362	244 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	PTS	Q03393	145 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	KIF19	Q2TAC6	998 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	GPRC6A	Q5T6X5	926 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ELMSAN1	Q6PJG2	1045 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	GPRIN3	Q6ZVF9	776 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ADIPOR2	Q86V24	386 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	KBTBD2	Q8IY47	623 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	MYO1H	Q8N1T3	1032 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	LEMD2	Q8NC56	503 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	CHST14	Q8NCH0	376 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	ZNF382	Q96SR6	550 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	BCAP29	Q9UHQ4	241 aa		13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TSR3	Q9UJK0	312 aa	Known RBP	13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	TNPO3	Q9Y5L0	923 aa	Known RBP	13.84	□□□□□ -0.19
RAB3IP-216	ENST00000552199	PLXNB3	Q9ULL4	1909 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199		A0A1W2PQ67	120 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199		H3BNX3	289 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	MRAS	O14807	208 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	GIPC1	O14908	333 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	RAD51B	O15315	384 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	CHEK2	O96017	543 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	S100B	P04271	92 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	UGT2B4	P06133	528 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	HGF	P14210	728 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	LHCGR	P22888	699 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	IRX1	P78414	480 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	UBE3A	Q05086	875 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	FLOT2	Q14254	428 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	GSTA3	Q16772	222 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PRSS36	Q5K4E3	855 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	LY6G5C	Q5SRR4	150 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	HACD2	Q6Y1H2	254 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199		Q6ZVU0	165 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	SPATA19	Q7Z5L4	167 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PLPP6	Q8IY26	295 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	MIER2	Q8N344	545 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ZBTB2	Q8N680	514 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	RNF148	Q8N7C7	305 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PHOSPHO2	Q8TCD6	241 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ZNF184	Q99676	751 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	BRD9	Q9H8M2	597 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	LATS2	Q9NRM7	1088 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ZDHHC3	Q9NYG2	299 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ADA2	Q9NZK5	511 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ADAMTS6	Q9UKP5	1117 aa		13.83	□□□□□ -0.2
RAB3IP-216	ENST00000552199	VGLL3	A8MV65	326 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	WASH3P	C4AMC7	463 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199		E7ENX8	843 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	FFAR2	O15552	330 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	XYLB	O75191	536 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	BCAS2	O75934	225 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	OR4F21	O95013	312 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PRR35	P0CG20	571 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	MSX2	P35548	267 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	IRS1	P35568	1242 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	CLNS1A	P54105	237 aa	Known RBP	13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	XKR7	Q5GH72	579 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	OGFOD2	Q6N063	350 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	GDPD4	Q6W3E5	623 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ADGRG2	Q8IZP9	1017 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PDPR	Q8NCN5	879 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	HERVK_113	Q902F9	699 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	ZSWIM3	Q96MP5	696 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	MRPL40	Q9NQ50	206 aa	Known RBP	13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	PFDN4	Q9NQP4	134 aa		13.82	□□□□□ -0.2
RAB3IP-216	ENST00000552199	BATF3	Q9NR55	127 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms