RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 LNP1A1A4G5 178 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ARHGAP10A1A4S6 786 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TMEM247A6NEH6 219 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 KCNJ18B7U540 433 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 DSCR3O14972 297 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 INPPL1O15357 1258 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 YY2O15391 372 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 BCAR3O75815 825 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 EPN2O95208 641 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 HLA-DQA2P01906 255 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TUBB4AP04350 444 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ERBB2P04626 1255 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 EBLN1P0CF75 366 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 NR2F6P10588 404 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CTSAP10619 480 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ITGAMP11215 1152 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TMEM11P17152 192 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 HOXB9P17482 250 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 IL11P20809 199 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CSRP1P21291 193 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 UBA1P22314 1058 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MARK3P27448 753 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CALRP27797 417 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MPLP40238 635 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 UBA7P41226 1012 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CCR10P46092 362 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 AGTR2P50052 363 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 GNAQP50148 359 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 COPB1P53618 953 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 SLC37A1P57057 533 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 IRX4P78413 519 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 FAM189BP81408 668 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TFAP4Q01664 338 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CDC37Q16543 378 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 SLC18A3Q16572 532 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CCDC92Q53HC0 331 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ARHGEF16Q5VV41 709 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 DAB2IPQ5VWQ8 1189 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 C1QL3Q5VWW1 255 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ATG9BQ674R7 924 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 KRT80Q6KB66 452 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ZNF852Q6ZMS4 543 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 Q6ZS52 159 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 Q6ZWC4 215 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 HTR3DQ70Z44 454 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 GPAT4Q86UL3 456 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TMEM200AQ86VY9 491 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 LONP2Q86WA8 852 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 DNAAF5Q86Y56 855 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 PALB2Q86YC2 1186 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 RHPN2Q8IUC4 686 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ARHGAP12Q8IWW6 846 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 PLD5Q8N7P1 536 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 POC5Q8NA72 575 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MSANTD4Q8NCY6 345 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ITFG1Q8TB96 612 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 NACC2Q96BF6 587 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 PBKQ96KB5 322 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 JAKMIP1Q96N16 626 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 CAMK1GQ96NX5 476 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 H2AFJQ9BTM1 129 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MLST8Q9BVC4 326 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 KLHL4Q9C0H6 718 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 NT5C3AQ9H0P0 336 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ERVMER34-1Q9H9K5 563 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 IL17RBQ9NRM6 502 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 RGS18Q9NS28 235 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 TMEM74BQ9NUR3 256 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 GIMAP4Q9NUV9 329 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ARL8BQ9NVJ2 186 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ASNSD1Q9NWL6 643 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 SEC63Q9UGP8 760 aaKnown RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 ST3GAL5Q9UNP4 418 aa3.86□□□□□ -1.79
LIMA1-208ENST00000551691 HEMK1Q9Y5R4 338 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-208ENST00000551691 MYH15Q9Y2K3 1946 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 F5P12259 2224 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 DNHD1Q96M86 4753 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 C17orf113A0A1B0GUU1 675 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 DENND3A2RUS2 1198 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 SMTNL1A8MU46 457 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 MASP2O00187 686 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 SH2B2O14492 632 aaPredicted RBP3.85□□□□□ -1.79
LIMA1-208ENST00000551691 EXTL3O43909 919 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 PRAMEF2O60811 474 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 NDUFS3O75489 264 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 GCATO75600 419 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 SLU7O95391 586 aaKnown RBP3.85□□□□□ -1.79
LIMA1-208ENST00000551691 CAVIN2O95810 425 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 ABCB1P08183 1280 aaPredicted RBP3.85□□□□□ -1.79
LIMA1-208ENST00000551691 MYBL1P10243 752 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 CHRNB1P11230 501 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 SLC2A4P14672 509 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 ARSAP15289 507 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 NDUFS1P28331 727 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 GJC1P36383 396 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 GARSP41250 739 aaKnown RBP3.85□□□□□ -1.79
LIMA1-208ENST00000551691 MAGEA9P43362 315 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 DIO1P49895 249 aa3.85□□□□□ -1.79
LIMA1-208ENST00000551691 LIG4P49917 911 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms