RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	RAB40AL	P0C0E4	278 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GOLGA6D	P0CG33	693 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLC2A3	P11169	496 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGFBP2	P18065	325 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NELFE	P18615	380 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ERCC5	P28715	1186 aa	Predicted RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	YWHAZ	P63104	245 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CDK3	Q00526	305 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CDK17	Q00537	523 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ACOX1	Q15067	660 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	POU4F3	Q15319	338 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GPR19	Q15760	415 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PYCR3	Q53H96	274 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PLEKHS1	Q5SXH7	462 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	XP32	Q5T750	250 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	OTUD1	Q5VV17	481 aa	Predicted RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IYD	Q6PHW0	289 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CCDC73	Q6ZRK6	1079 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	BEND5	Q7L4P6	421 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PHLDB2	Q86SQ0	1253 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RAB43	Q86YS6	212 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KRTAP1-3	Q8IUG1	177 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TMEM126B	Q8IUX1	230 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DSEL	Q8IZU8	1212 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TTC30B	Q8N4P2	665 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TTC39C	Q8N584	583 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	UBR7	Q8N806	425 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SIDT2	Q8NBJ9	832 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CLEC1A	Q8NC01	280 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CCDC150	Q8NCX0	1101 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RSC1A1	Q92681	617 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GDAP1L1	Q96MZ0	367 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GBP5	Q96PP8	586 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ALPK1	Q96QP1	1244 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TEX101	Q9BY14	249 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NLN	Q9BYT8	704 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TTYH3	Q9C0H2	523 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	GOLGA6A	Q9NYA3	693 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CGN	Q9P2M7	1197 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CNOT8	Q9UFF9	292 aa	Known RBP	5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KCNK6	Q9Y257	313 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLC17A4	Q9Y2C5	497 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ATP8A1	Q9Y2Q0	1164 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FHOD1	Q9Y613	1164 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CLIC4	Q9Y696	253 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SCN2A	Q99250	2005 aa		5.79	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ANK3	Q12955	4377 aa	Known RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGLV3-10	A0A075B6K4	115 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TSPAN11	A1L157	253 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NKX2-6	A6NCS4	301 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LDB2	O43679	373 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CUTA	O60888	179 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TMCC1	O94876	653 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	UBXN7	O94888	489 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGSF6	O95976	241 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGLV1-40	P01703	118 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ELFN1	P0C7U0	828 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PDIA4	P13667	645 aa	Known RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	AMD1	P17707	334 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DNASE1	P24855	282 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RPL34	P49207	117 aa	Known RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DGKQ	P52824	942 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PPP2R2B	Q00005	443 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LRMP	Q12912	555 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CUL2	Q13617	745 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PTCHD3	Q3KNS1	767 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZFYVE27	Q5T4F4	411 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DENND2C	Q68D51	928 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FCRL6	Q6DN72	434 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IRGC	Q6NXR0	463 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ERAP2	Q6P179	960 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	DENND1B	Q6P3S1	775 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TMEM270	Q6UE05	265 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	IGFL2	Q6UWQ7	119 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	BEND4	Q6ZU67	534 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PRSS42	Q7Z5A4	293 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLC9B2	Q86UD5	537 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CAMK1D	Q8IU85	385 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ULK2	Q8IYT8	1036 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	OR1N1	Q8NGS0	311 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SH3KBP1	Q96B97	665 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NUS1	Q96E22	293 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	ZNF514	Q96K75	400 aa	Predicted RBP	5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	FER1L6-AS2	Q96M78	137 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SLC2A13	Q96QE2	648 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NCAPG	Q9BPX3	1015 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	NDC1	Q9BTX1	674 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KLC2	Q9H0B6	622 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	BLZF1	Q9H2G9	400 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	KCTD10	Q9H3F6	313 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	TMEM8A	Q9HCN3	771 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	PIGV	Q9NUD9	493 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RAB20	Q9NX57	234 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	CPNE7	Q9UBL6	633 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	SEC14L3	Q9UDX4	400 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	RNF112	Q9ULX5	631 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	LIMCH1	Q9UPQ0	1083 aa		5.78	□□□□□ -1.48
RACGAP1-223	ENST00000551260	HIF3A	Q9Y2N7	669 aa		5.78	□□□□□ -1.48

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