RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 UBXN4Q92575 508 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 LPGAT1Q92604 370 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 P2RY12Q9H244 342 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 TRNAU1APQ9NX07 287 aaKnown RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 APOBEC3BQ9UH17 382 aaKnown RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 FBXO5Q9UKT4 447 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 GPR34Q9UPC5 381 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
RAB5C-206ENST00000550406 ZFHX2Q9C0A1 2572 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 EP300Q09472 2414 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-206ENST00000550406 TCRBV9S1A1TA0A576 114 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 AQP9O43315 295 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 PCDHGA12O60330 932 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 POP7O75817 140 aaKnown RBP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 HAUS5O94927 633 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 AHSGP02765 367 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 GSTA2P09210 222 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 CD59P13987 128 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 NSG1P42857 185 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 ARRB1P49407 418 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 TTPAP49638 278 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 CCT8P50990 548 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 BLKP51451 505 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 THOC5Q13769 683 aaKnown RBP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 BCL7AQ4VC05 210 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 CTSL3PQ5NE16 218 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF549Q6P9A3 640 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 CHST15Q7LFX5 561 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 LRRTM4Q86VH4 590 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 GALNT13Q8IUC8 556 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 LMX1AQ8TE12 382 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 DCUN1D1Q96GG9 259 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 BIRC8Q96P09 236 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 OR2M4Q96R27 311 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 TCF12Q99081 682 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 EPB41L4BQ9H329 900 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 FBXO6Q9NRD1 293 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-206ENST00000550406 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 FAM186AA6NE01 2351 aa12.85□□□□□ -0.35
RAB5C-206ENST00000550406 FAM159BA6NKW6 160 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 IQCF5A8MTL0 148 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 H3BM21 787 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 KMOO15229 486 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 YY2O15391 372 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 NDUFS3O75489 264 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 AP2A2O94973 939 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 ACP5P13686 325 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 CTSEP14091 401 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF7P17097 686 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 RPS3P23396 243 aaKnown RBP eCLIP12.84□□□□□ -0.358e-7■■□□□ 11.4
RAB5C-206ENST00000550406 PMLP29590 882 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 LEPRP48357 1165 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 PRLHRP49683 370 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 ATXN3P54252 364 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 MGAT5Q09328 741 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 PLA2G4EQ3MJ16 856 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 AARS2Q5JTZ9 985 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 CNSTQ6PJW8 725 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 FAM83HQ6ZRV2 1179 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 SDCCAG8Q86SQ7 713 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 TRAPPC5Q8IUR0 188 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 LILRA3Q8N6C8 439 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 GPR161Q8N6U8 529 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 LKAAEAR1Q8TD35 194 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 CALML6Q8TD86 181 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 FBF1Q8TES7 1133 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 LINC00615Q96LM1 132 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 MCMBPQ9BTE3 642 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 FUT8Q9BYC5 575 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 ZCCHC2Q9C0B9 1178 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 TSPYL1Q9H0U9 437 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 SPATS2LQ9NUQ6 558 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 INTS10Q9NVR2 710 aaKnown RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 BTBD3Q9Y2F9 522 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 CRYL1Q9Y2S2 319 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 PCDHGB2Q9Y5G2 931 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 PSAT1Q9Y617 370 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 DNMT3AQ9Y6K1 912 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-206ENST00000550406 CSNK1G3Q9Y6M4 447 aa12.84□□□□□ -0.35
RAB5C-206ENST00000550406 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms