RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NAPRTQ6XQN6 538 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 SERPINA9Q86WD7 417 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NXPE1Q8N323 547 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 CLDN19Q8N6F1 224 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NAT8LQ8N9F0 302 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 MAPK15Q8TD08 544 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 STYXQ8WUJ0 223 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 RANBP9Q96S59 729 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 WDR83Q9BRX9 315 aaKnown RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 PLAC1Q9HBJ0 212 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 HOMER3Q9NSC5 361 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 TREX1Q9NSU2 369 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF624Q9P2J8 865 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 LRIT1Q9P2V4 623 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 FAM8A1Q9UBU6 413 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 FEZ2Q9UHY8 353 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-208ENST00000550283 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 NEUROG3Q9Y4Z2 214 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 FAM208BQ5VWN6 2430 aa11.04□□□□□ -0.64
RAB5B-208ENST00000550283 ZFC3H1O60293 1989 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 GOLGA8KD6RF30 607 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 GOLGA8TH3BQL2 631 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 TAF4O00268 1085 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 TTI1O43156 1089 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 VEGFDO43915 354 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 PPFIA2O75334 1257 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 POP7O75817 140 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 MT-CO3P00414 261 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 GOT2P00505 430 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 CSF2RBP32927 897 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 MAGEA3P43357 314 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 FNTAP49354 379 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 ETF1P62495 437 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 CLCA4Q14CN2 919 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 LDLRAP1Q5SW96 308 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 RNASEH2BQ5TBB1 312 aaKnown RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 LRRC8BQ6P9F7 803 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 IYDQ6PHW0 289 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF574Q6ZN55 896 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF438Q7Z4V0 828 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 SPRED1Q7Z699 444 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 LRRTM4Q86VH4 590 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 TRAPPC5Q8IUR0 188 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 SFRP1Q8N474 314 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 DCBLD1Q8N8Z6 715 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 LKAAEAR1Q8TD35 194 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 JPH3Q8WXH2 748 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 MFSD3Q96ES6 412 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 FCRL3Q96P31 734 aaPredicted RBP11.03□□□□□ -0.64
RAB5B-208ENST00000550283 FOXP3Q9BZS1 431 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 OSGEPL1Q9H4B0 414 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 RMI1Q9H9A7 625 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 TMEM9Q9P0T7 183 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 PCYOX1Q9UHG3 505 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 PSMD13Q9UNM6 376 aa11.03□□□□□ -0.64
RAB5B-208ENST00000550283 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 TRABD2BA6NFA1 517 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 OR52A4PA6NMU1 304 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 KMOO15229 486 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 CSO75390 466 aaKnown RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 TRIM16O95361 564 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 TUBB4AP04350 444 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 RPLP0P05388 317 aaKnown RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 GP1BAP07359 652 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 GLB1P16278 677 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ADRA1DP25100 572 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ACRV1P26436 265 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 CD1CP29017 333 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 AKT1P31749 480 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ACTN2P35609 894 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 SLC19A1P41440 591 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 UBE2IP63279 158 aaKnown RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ILKQ13418 452 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ITGA9Q13797 1035 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 PTK6Q13882 451 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 LRP8Q14114 963 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 INSCQ1MX18 579 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ZDHHC20Q5W0Z9 365 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 DUS1LQ6P1R4 473 aaKnown RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 TAS2R42Q7RTR8 314 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 CCNJLQ8IV13 435 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 IGDCC3Q8IVU1 814 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 UNC5BQ8IZJ1 945 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 GPR150Q8NGU9 434 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 SCG3Q8WXD2 468 aaKnown RBP11.02□□□□□ -0.65
RAB5B-208ENST00000550283 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 ATXN7L3BQ96GX2 97 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 SERPINB12Q96P63 405 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 NUDT22Q9BRQ3 303 aa11.02□□□□□ -0.65
RAB5B-208ENST00000550283 SYNDIG1Q9H7V2 258 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms