RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CDK18Q07002 472 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 AGAP9Q5VTM2 703 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 PDPK2PQ6A1A2 396 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 TCTN3Q6NUS6 607 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 NPNTQ6UXI9 565 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 WASH2PQ6VEQ5 465 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 C11orf96Q7Z7L8 435 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 NT5DC3Q86UY8 548 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 SPATA22Q8NHS9 363 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 TADA1Q96BN2 335 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 RUFY1Q96T51 708 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 BPIFA1Q9NP55 256 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 WASH6PQ9NQA3 447 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 KCND3Q9UK17 655 aa15.13■□□□□ 0.01
RAB5C-205ENST00000550013 MED13Q9UHV7 2174 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 IGHV5-51A0A0C4DH38 117 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 LRRD1A4D1F6 860 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 BLACEA4D250 179 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 CREG1O75629 220 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 DNAJB5O75953 348 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 MT-CYBP00156 380 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-205ENST00000550013 NTRK1P04629 796 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 CCNYL3P0C7X3 344 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 NELFEP18615 380 aaKnown RBP15.12■□□□□ 0.01
RAB5C-205ENST00000550013 CASP14P31944 242 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 KCNAB1Q14722 419 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB5C-205ENST00000550013 ATP13A5Q4VNC0 1218 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 SLC9A4Q6AI14 798 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 PPP1R3BQ86XI6 285 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 TRAPPC5Q8IUR0 188 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 GPR150Q8NGU9 434 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 ZDHHC12Q96GR4 267 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 PSMG3-AS1Q96PY0 264 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 SLC25A51Q9H1U9 297 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 AKIRIN1Q9H9L7 192 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-205ENST00000550013 LHX9Q9NQ69 397 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 EPHA6Q9UF33 1036 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 PADI1Q9ULC6 663 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
RAB5C-205ENST00000550013 PCDHGA6Q9Y5G7 932 aa15.12■□□□□ 0.01
RAB5C-205ENST00000550013 C3orf70A6NLC5 250 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 PMPCBO75439 489 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 NDST3O95803 873 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 GYPCP04921 128 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 FOLR1P15328 257 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 UQCRFS1P47985 274 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 UBASH3AP57075 661 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 TMEM115Q12893 351 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 TUBB3Q13509 450 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 MESDQ14696 234 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 NOMO1Q15155 1222 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 PWWP2BQ6NUJ5 590 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 CERS6Q6ZMG9 384 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 LUZP1Q86V48 1076 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 ATCAYQ86WG3 371 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 LURAP1LQ8IV03 231 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 RBM12BQ8IXT5 1001 aaKnown RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 SIDT2Q8NBJ9 832 aaKnown RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 GDAP1Q8TB36 358 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 CTNNBL1Q8WYA6 563 aaPredicted RBP15.11■□□□□ 0.01
RAB5C-205ENST00000550013 OLFM3Q96PB7 478 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 VPS35Q96QK1 796 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 TRIM55Q9BYV6 548 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 ACTL8Q9H568 366 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 GLOD4Q9HC38 313 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 CBX8Q9HC52 389 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 UBP1Q9NZI7 540 aa15.11■□□□□ 0.01
RAB5C-205ENST00000550013 APOL1O14791 398 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 MT-ND3P03897 115 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 RPS18P62269 152 aaKnown RBP15.1■□□□□ 0.01
RAB5C-205ENST00000550013 PDK1Q15118 436 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 FAM199XQ6PEV8 388 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-205ENST00000550013 FAM83HQ6ZRV2 1179 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-205ENST00000550013 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-205ENST00000550013 SLC41A2Q96JW4 573 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 RAB33BQ9H082 229 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 PDE7BQ9NP56 450 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 SEMA5BQ9P283 1151 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 RARRES3Q9UL19 164 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 SPTBP11277 2137 aa15.1■□□□□ 0.01
RAB5C-205ENST00000550013 NOTCH2Q04721 2471 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 ZNF487B1APH4 448 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 C21orf140B9A014 251 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
RAB5C-205ENST00000550013 GPR39O43194 453 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 EBLN1P0CF75 366 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 VCLP18206 1134 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 FECHP22830 423 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 CA5AP35218 305 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 HALP42357 657 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 CTSCP53634 463 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 DYNLT1P63172 113 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 CHAF1BQ13112 559 aa15.09■□□□□ 0.01
RAB5C-205ENST00000550013 SEMA5AQ13591 1074 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms