RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 XIAPP98170 497 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 DSC1Q08554 894 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 EIF4EBP2Q13542 120 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 B4GALNT2Q8NHY0 566 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 WFDC5Q8TCV5 224 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 KIAA1191Q96A73 305 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 TSSK3Q96PN8 268 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 COMMD3-BMI1R4GMX3 469 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ZBTB11O95625 1053 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 GALTP07902 379 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 IDO1P14902 403 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ADSLP30566 484 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 CSKP41240 450 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 GPR17Q13304 367 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 GTDC1Q4AE62 458 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 RFTN2Q52LD8 501 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 AFMIDQ63HM1 303 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 GLYATQ6IB77 296 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ANKS3Q6ZW76 656 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 RNF175Q8N4F7 328 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 KRTCAP2Q8N6L1 136 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 OR4F6Q8NGB9 312 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 NSMCE2Q96MF7 247 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 PLEKHG4BQ96PX9 1271 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ADI1Q9BV57 179 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 TRIM15Q9C019 465 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 TMEM181Q9P2C4 612 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF225Q9UK10 706 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 CDC14AQ9UNH5 594 aa13.51□□□□□ -0.25
PRPF40B-209ENST00000548825 A0A1W2PQ45 241 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 A0A1W2PQY0 241 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 TRIM24O15164 1050 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 STC2O76061 302 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 SEC24AO95486 1093 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 NANOGP8Q6NSW7 305 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 RFLNAQ6ZTI6 216 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 ZNF683Q8IZ20 524 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 ITCHQ96J02 903 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 CHID1Q9BWS9 393 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 MRPS26Q9BYN8 205 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 NANOGQ9H9S0 305 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 POLR1BQ9H9Y6 1135 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 SDK1Q7Z5N4 2213 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 PABPN1LA6NDY0 278 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 ARVCFO00192 962 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 DENRO43583 198 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 H6PDO95479 791 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 EOMESO95936 686 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 PRLP01236 227 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 AKT1P31749 480 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 STT3AP46977 705 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 POLD2P49005 469 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 FAM174BQ3ZCQ3 159 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 C6orf136Q5SQH8 315 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 TSPAN33Q86UF1 283 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 APCDD1Q8J025 514 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 PSKH2Q96QS6 385 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 MARCH5Q9NX47 278 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 AASSQ9UDR5 926 aa13.5□□□□□ -0.25
PRPF40B-209ENST00000548825 SMIM31A0A1B0GVY4 71 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 MYO1GB0I1T2 1018 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 PAPSS2O95340 614 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 IL12AP29459 219 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 NR1H2P55055 460 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 PRKG2Q13237 762 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 DYNC1I2Q13409 638 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 CCDC117Q8IWD4 279 aaPredicted RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 LKAAEAR1Q8TD35 194 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.49□□□□□ -0.254e-6■■■■■ 41.2
PRPF40B-209ENST00000548825 HAUS8Q9BT25 410 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ATG10Q9H0Y0 220 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 TFB2MQ9H5Q4 396 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ACTR8Q9H981 624 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 RIC8BQ9NVN3 520 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 MAGEB3O15480 346 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 LDLRP01130 860 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 CYP4B1P13584 511 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 ELK4P28324 431 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 CA5AP35218 305 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 HSPA13P48723 471 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 TTPAP49638 278 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 GTF2H3Q13889 308 aa13.49□□□□□ -0.25
PRPF40B-209ENST00000548825 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms