RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZNF711Q9Y462 761 aa16.18■□□□□ 0.18
SSH1-208ENST00000548522 ICE1Q9Y2F5 2266 aa16.18■□□□□ 0.18
SSH1-208ENST00000548522 RP1L1Q8IWN7 2480 aaPredicted RBP16.17■□□□□ 0.18
SSH1-208ENST00000548522 PIPSLA2A3N6 862 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 MYO1FO00160 1098 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 AURKAO14965 403 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 TOX3O15405 576 aaPredicted RBP16.17■□□□□ 0.18
SSH1-208ENST00000548522 SERPINC1P01008 464 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 BPIP17213 487 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 GNLYP22749 145 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 CASP14P31944 242 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 DCDC1P59894 354 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 CHAF1BQ13112 559 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 IL11RAQ14626 422 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 PCSK7Q16549 785 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
SSH1-208ENST00000548522 B4GALNT4Q76KP1 1039 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 C11orf96Q7Z7L8 435 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 LRRTM4Q86VH4 590 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 VSTM4Q8IW00 320 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 TRAM1L1Q8N609 369 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 GPR150Q8NGU9 434 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 KLHL6Q8WZ60 621 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 ZSCAN5AQ9BUG6 496 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 LHX9Q9NQ69 397 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 POT1Q9NUX5 634 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 PCDHGA6Q9Y5G7 932 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 SPO11Q9Y5K1 396 aa16.17■□□□□ 0.18
SSH1-208ENST00000548522 PRRC2CQ9Y520 2896 aaKnown RBP16.17■□□□□ 0.18
SSH1-208ENST00000548522 IGHV5-51A0A0C4DH38 117 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 GPR39O43194 453 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 FOLR1P15328 257 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 NELFEP18615 380 aaKnown RBP16.16■□□□□ 0.18
SSH1-208ENST00000548522 IFI35P80217 286 aaPredicted RBP16.16■□□□□ 0.18
SSH1-208ENST00000548522 IL10RAQ13651 578 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSH1-208ENST00000548522 FILIP1LQ4L180 1135 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 CAPRIN2Q6IMN6 1127 aaKnown RBP16.16■□□□□ 0.18
SSH1-208ENST00000548522 PWWP2BQ6NUJ5 590 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 FAM199XQ6PEV8 388 aaPredicted RBP16.16■□□□□ 0.18
SSH1-208ENST00000548522 ABRAXAS1Q6UWZ7 409 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 TMC3Q7Z5M5 1100 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 PPP1R3BQ86XI6 285 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 PLD5Q8N7P1 536 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 RAPGEF5Q92565 580 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 TIMM29Q9BSF4 260 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 ADGRE3Q9BY15 652 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 HAUS2Q9NVX0 235 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 NFKBIL1Q9UBC1 381 aaPredicted RBP16.16■□□□□ 0.18
SSH1-208ENST00000548522 KCND3Q9UK17 655 aa16.16■□□□□ 0.18
SSH1-208ENST00000548522 GPR89AB7ZAQ6 455 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 KMOO15229 486 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 PROSCO94903 275 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 EBLN1P0CF75 366 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 GPR89BP0CG08 455 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 MX2P20592 715 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 CA5AP35218 305 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
SSH1-208ENST00000548522 TUBB3Q13509 450 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 SEMA5AQ13591 1074 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 NR1I3Q14994 352 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 NOMO1Q15155 1222 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 NADK2Q4G0N4 442 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 TRAPPC5Q8IUR0 188 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 SPATA22Q8NHS9 363 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 CXorf40BQ96DE9 158 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 IMP4Q96G21 291 aaKnown RBP16.15■□□□□ 0.18
SSH1-208ENST00000548522 AGAP3Q96P47 875 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 BPIFA1Q9NP55 256 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 PADI1Q9ULC6 663 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 NENFQ9UMX5 172 aa16.15■□□□□ 0.18
SSH1-208ENST00000548522 TTLL8A6PVC2 850 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 CDK14O94921 469 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 MT-CYBP00156 380 aaPredicted RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 CCNYL3P0C7X3 344 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 LAMB3Q13751 1172 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 PDK2Q15119 407 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 ATP13A5Q4VNC0 1218 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 PRR30Q53SZ7 412 aaPredicted RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 AGAP9Q5VTM2 703 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 ALKBH5Q6P6C2 394 aaKnown RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 FAM83HQ6ZRV2 1179 aaPredicted RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 APLFQ8IW19 511 aaPredicted RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 ZDHHC12Q96GR4 267 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 SLC41A2Q96JW4 573 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 PACSIN1Q9BY11 444 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 GPR63Q9BZJ6 419 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 PLEKHB1Q9UF11 243 aaPredicted RBP16.14■□□□□ 0.17
SSH1-208ENST00000548522 EPHA6Q9UF33 1036 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 HEY1Q9Y5J3 304 aa16.14■□□□□ 0.17
SSH1-208ENST00000548522 CENPEQ02224 2701 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 TNRC6AQ8NDV7 1962 aaKnown RBP16.13■□□□□ 0.17
SSH1-208ENST00000548522 VEGFDO43915 354 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 AGFG2O95081 481 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 TUBB4AP04350 444 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 SERPING1P05155 500 aa16.13■□□□□ 0.17
SSH1-208ENST00000548522 IDSP22304 550 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms