RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 STARD3Q14849 445 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 OR4D1Q15615 310 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 TSNQ15631 228 aaKnown RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 SH2D4BQ5SQS7 431 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 HENMT1Q5T8I9 393 aaKnown RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CES4AQ5XG92 561 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 Q6ZVL8 140 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 PARS2Q7L3T8 475 aaKnown RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 HSD11B1LQ7Z5J1 315 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 RALGPS2Q86X27 583 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CPNE9Q8IYJ1 553 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CHPFQ8IZ52 775 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 TCAIMQ8N3R3 496 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF781Q8N8C0 355 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 SMRP1Q8NCR6 262 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CEP70Q8NHQ1 597 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 ASZ1Q8WWH4 475 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CMTM5Q96DZ9 223 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 RIOK2Q9BVS4 552 aaKnown RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 CYP4F12Q9HCS2 524 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 PRSS16Q9NQE7 514 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 SCML1Q9UN30 329 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 STON1Q9Y6Q2 735 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 KLHL33A6NCF5 533 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 MYO1CO00159 1063 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 AREL1O15033 823 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 TBX10O75333 385 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 CRCPO75575 148 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 TSPAN12O95859 305 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 VCLP18206 1134 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 AOC1P19801 751 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 DRD1P21728 446 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 SP100P23497 879 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 PTPN4P29074 926 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 PRDX6P30041 224 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 GALK1P51570 392 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 PKNOX1P55347 436 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 RALGDSQ12967 914 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 LCP2Q13094 533 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 SP140Q13342 867 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 CAMK2GQ13555 558 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HTR4Q13639 388 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HSF5Q4G112 596 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 SULT1C3Q6IMI6 304 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 PHYKPLQ8IUZ5 450 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 DNASE1L2Q92874 299 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 FGF14Q92915 247 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 GLYATL1Q969I3 302 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 DTD2Q96FN9 168 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 COQ10AQ96MF6 247 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 GAS2L1Q99501 681 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 HIST1H2AJQ99878 128 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 RSPH9Q9H1X1 276 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-215ENST00000547672 ABCG8Q9H221 673 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 TRAF6Q9Y4K3 522 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 CAPN7Q9Y6W3 813 aa13.26□□□□□ -0.29
PTCH1-215ENST00000547672 PDE4DIPQ5VU43 2346 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 A0A0U1RQS6 177 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 UBXN8O00124 270 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 CDC7O00311 574 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ARNTLO00327 626 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF195O14628 629 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ATG13O75143 517 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 HLA-EP13747 358 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 MTHFD2P13995 350 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 NCF2P19878 526 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 AOAHP28039 575 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 NTSR1P30989 418 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ETV3P41162 512 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 IL12RB1P42701 662 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 KCNC1P48547 511 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 PGGT1BP53609 377 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 CDKL1Q00532 357 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 CLCQ05315 142 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 GRSF1Q12849 480 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 PCBP2Q15366 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 TGFBIQ15582 683 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 UNC50Q53HI1 259 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF776Q68DI1 518 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 CUZD1Q86UP6 607 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 MMAAQ8IVH4 418 aaKnown RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 LSMEM2Q8N112 164 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 CLDN19Q8N6F1 224 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 ACTRT2Q8TDY3 377 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 MYLIPQ8WY64 445 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 EXT2Q93063 718 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 NUS1Q96E22 293 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 MAGEB10Q96LZ2 347 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-215ENST00000547672 BOCQ9BWV1 1114 aa13.25□□□□□ -0.29
PTCH1-215ENST00000547672 C1QTNF7Q9BXJ2 289 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms