RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CHD8Q9HCK8 2581 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 TMEM131Q92545 1883 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 CABIN1Q9Y6J0 2220 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 PCNX2A6NKB5 2137 aa17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 TP53BP1Q12888 1972 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-207ENST00000547338 A0A1B0GVT2 93 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 A0A1W2PPC4 97 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 MROH6A6NGR9 719 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 LRRC72A6NJI9 287 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 LEFTY1O75610 366 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 FGF1P05230 155 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 PRDX6P30041 224 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 GKP32189 559 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 ETFBP38117 255 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 CCR5P51681 352 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 CCNHP51946 323 aaPredicted RBP17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 CCNG1P51959 295 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC12A2P55011 1212 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 CNGA3Q16281 694 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 UAP1L1Q3KQV9 507 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 ARSIQ5FYB1 569 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 FAM46CQ5VWP2 391 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 CES4AQ5XG92 561 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 STYXQ8WUJ0 223 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 ISG20Q96AZ6 181 aaKnown RBP17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 SORT1Q99523 831 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 TM6SF2Q9BZW4 377 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 C20orf27Q9GZN8 174 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 DRC3Q9H069 523 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 PDFQ9HBH1 243 aa17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 NOP53Q9NZM5 478 aaKnown RBP17.12■□□□□ 0.33
RBFOX1-207ENST00000547338 FAM95CA0A1B0GW59 222 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 C1QTNF3-AMACRE9PGA6 284 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC22A2O15244 555 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 KCNK5O95279 499 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 HSPA4LO95757 839 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 WNT1P04628 370 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 CD59P13987 128 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ADSLP30566 484 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 DNAJB13P59910 316 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ACVR1Q04771 509 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ITKQ08881 620 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC10A7Q0GE19 358 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ITGA9Q13797 1035 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 CARD16Q5EG05 197 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 PLD6Q8N2A8 252 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 TEX9Q8N6V9 391 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 FAM13CQ8NE31 585 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ARRDC2Q8TBH0 407 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 MCUR1Q96AQ8 359 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SLC6A18Q96N87 628 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 FBXO6Q9NRD1 293 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 IL36AQ9UHA7 158 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 RUVBL2Q9Y230 463 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 RAP2CQ9Y3L5 183 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 J3KR12 359 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 KPNA3O00505 521 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ITM2AO43736 263 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 TMCC1O94876 653 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 MMP2P08253 660 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 RBP1P09455 135 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 CD86P42081 329 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 AFF3P51826 1226 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 RAP1GDS1P52306 607 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 FOXK2Q01167 660 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SFSWAPQ12872 951 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 PRKAA1Q13131 559 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 FAM83EQ2M2I3 478 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 KIF19Q2TAC6 998 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ATXN7L2Q5T6C5 722 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 ZCCHC23Q6ZST2 131 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 PLPP6Q8IY26 295 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 GPR150Q8NGU9 434 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 OR6K2Q8NGY2 324 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 CADM1Q9BY67 442 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 CDH19Q9H159 772 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 DCLRE1BQ9H816 532 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 TAS2R1Q9NYW7 299 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SEPT3Q9UH03 358 aa17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 FNDC3AQ9Y2H6 1198 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-207ENST00000547338 SHROOM3Q8TF72 1996 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 A0A1W2PR77 199 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 UPK3BL1B0FP48 263 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 UPK3BL2E5RIL1 263 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 SPINT1O43278 529 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 NPHS1O60500 1241 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 TOP3BO95985 862 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 PRNPP04156 253 aa17.1■□□□□ 0.33
RBFOX1-207ENST00000547338 SYPP08247 313 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms