RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 GOLGA8KD6RF30 607 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 GOLGA8TH3BQL2 631 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 FFAR2O15552 330 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 BANF1O75531 89 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 LDOC1O95751 146 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 GSTM1P09488 218 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 OR56A5P0C7T3 313 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 PRSS56P0CW18 603 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ACP5P13686 325 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 OGNP20774 298 aaKnown RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ARNTP27540 789 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 CA5AP35218 305 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ACTR1BP42025 376 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 RPIAP49247 311 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 CLCNKAP51800 687 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ACTR1AP61163 376 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 GSTM4Q03013 218 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 RSPO4Q2I0M5 234 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 DEFB133Q30KQ1 61 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 KCTD16Q68DU8 428 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ZNF449Q6P9G9 518 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 CRTC3Q6UUV7 619 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ZDHHC24Q6UX98 284 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 PACS1Q6VY07 963 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 UNC5AQ6ZN44 842 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 KCNMB4Q86W47 210 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 LRRC6Q86X45 466 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 IGDCC3Q8IVU1 814 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
PTCH1-213ENST00000546820 DPEP2Q9H4A9 486 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 ZDHHC18Q9NUE0 388 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 FRYLO94915 3013 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 WDR87Q6ZQQ6 2873 aa13.57□□□□□ -0.24
PTCH1-213ENST00000546820 DMDP11532 3685 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 PRMT5O14744 637 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 FTH1P02794 183 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 GSTA2P09210 222 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 SLC2A4P14672 509 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 IDSP22304 550 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 MAGEA4P43358 317 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 B4GALNT1Q00973 533 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 TCEA2Q15560 299 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 BCL7AQ4VC05 210 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 HSP90AA5PQ58FG0 334 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 STEAP4Q687X5 459 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 SLC30A9Q6PML9 568 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 PIP4P1Q86T03 277 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 CCL4L1Q8NHW4 92 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 GSDMBQ8TAX9 411 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 CERS2Q96G23 380 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 LINC00615Q96LM1 132 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 FMO2Q99518 471 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 CCM2Q9BSQ5 444 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 BOCQ9BWV1 1114 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 INTS10Q9NVR2 710 aaKnown RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 TAAR2Q9P1P5 351 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-213ENST00000546820 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
PTCH1-213ENST00000546820 ZNF292O60281 2723 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 C17orf113A0A1B0GUU1 675 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 MGAT4DA6NG13 374 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 OR5K4A6NMS3 321 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 H3BMM5 538 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 TRIM38O00635 465 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 TM4SF5O14894 197 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 SIGLEC6O43699 453 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 CELA2BP08218 269 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 AK4P27144 223 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 CARSP49589 748 aaKnown RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 PRLHRP49683 370 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 CTSCP53634 463 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 SEMA3AQ14563 771 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 TYSND1Q2T9J0 566 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 PLA2G4EQ3MJ16 856 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 ZNF470Q6ECI4 717 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 OGFOD3Q6PK18 319 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 C3orf62Q6ZUJ4 267 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 CYS1Q717R9 158 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 NRROSQ86YC3 692 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 ZNF547Q8IVP9 402 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 CLDN19Q8N6F1 224 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 BEND7Q8N7W2 519 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 EIF1ADQ8N9N8 165 aaKnown RBP13.55□□□□□ -0.24
PTCH1-213ENST00000546820 FAM181AQ8N9Y4 354 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 OR6C4Q8NGE1 309 aa13.55□□□□□ -0.24
PTCH1-213ENST00000546820 OR2L2Q8NH16 312 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms