RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PLOD2O00469 737 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 AP3D1O14617 1153 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 SLC7A4O43246 635 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ITGB6P18564 788 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 RBM34P42696 430 aaKnown RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 MAZP56270 477 aaKnown RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 GRM3Q14832 879 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 USP7Q93009 1102 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 KCTD7Q96MP8 289 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 PRICKLE1Q96MT3 831 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 LGMNQ99538 433 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 MTFR1LQ9H019 292 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 PIDD1Q9HB75 910 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 IL1RAPQ9NPH3 570 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ARPC2O15144 300 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 DARSP14868 501 aaKnown RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 GOT1P17174 413 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 SKP1P63208 163 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 CLCQ05315 142 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 SRSF11Q05519 484 aaKnown RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 HACD2Q6Y1H2 254 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 DEF8Q6ZN54 512 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 CYS1Q717R9 158 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 TOR1AIP2Q8NFQ8 470 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 TNFAIP8L1Q8WVP5 186 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 SEPT5Q99719 369 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 MROH8Q9H579 483 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 RANBP3Q9H6Z4 567 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 POLR3HQ9Y535 204 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-212ENST00000546744 K7EPI3 171 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 KERAO60938 352 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 PPP5CP53041 499 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 CDH13P55290 713 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 WNT3AP56704 352 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 DCDC1P59894 354 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 CARTPTQ16568 116 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 FKBP1CQ5VVH2 108 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 RBFAQ8N0V3 343 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 OR52K2Q8NGK3 314 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ULBP1Q9BZM6 244 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 SLA2Q9H6Q3 261 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 ATP13A1Q9HD20 1204 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 VPS28Q9UK41 221 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 PLCL2Q9UPR0 1127 aa12.68□□□□□ -0.38
PTCH1-212ENST00000546744 FAM155BO75949 473 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SLC2A2P11168 524 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ACSL1P33121 698 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 MNDAP41218 407 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CPT1AP50416 773 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 IQCCQ4KMZ1 466 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 OR52E8Q6IFG1 317 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 DCLRE1AQ6PJP8 1040 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CMASQ8NFW8 434 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SLC13A3Q8WWT9 602 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 LRRC58Q96CX6 371 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 POLR3BQ9NW08 1133 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TOR1BO14657 336 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 STX16O14662 325 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 UGT2B17O75795 530 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 PIAS1O75925 651 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CHRNB2P17787 502 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 DLG2Q15700 870 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SNAPC1Q16533 368 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 FAM20CQ8IXL6 584 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 JOSD2Q8TAC2 188 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 DMRTB1Q96MA1 342 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 DPAGT1Q9H3H5 408 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ZFP14Q9HCL3 533 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 GLS2Q9UI32 602 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 U3KQV3 271 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 WNT7AO00755 349 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 RFPL2O75678 378 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TMEM63AO94886 807 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 IGSF6O95976 241 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CSH1P0DML2 217 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CSH2P0DML3 217 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 AZGP1P25311 298 aaKnown RBP12.67□□□□□ -0.38
PTCH1-212ENST00000546744 STOMP27105 288 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CENPAP49450 140 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 MFSD14CQ5VZR4 134 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 TAPT1Q6NXT6 567 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ZNF438Q7Z4V0 828 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 GPALPP1Q8IXQ4 340 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 ANKFN1Q8N957 763 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 HAPLN3Q96S86 360 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 CCDC106Q9BWC9 280 aa12.67□□□□□ -0.38
PTCH1-212ENST00000546744 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms