RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ETAA1Q9NY74 926 aa6.68□□□□□ -1.34
CCDC60-205ENST00000546345 NCKIPSDQ9NZQ3 722 aa6.68□□□□□ -1.34
CCDC60-205ENST00000546345 ERRFI1Q9UJM3 462 aaPredicted RBP6.68□□□□□ -1.34
CCDC60-205ENST00000546345 NAALADL1Q9UQQ1 740 aa6.68□□□□□ -1.34
CCDC60-205ENST00000546345 CACNA1CQ13936 2221 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 A0A087X0B3 334 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 A0A1B0GTL3 188 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 TLDC2A0PJX2 215 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF233A6NK53 670 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 NKX2-8O15522 239 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 DDAH2O95865 285 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CTSLP07711 333 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 MYZAPP0CAP1 466 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 IDEP14735 1019 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 FERP16591 822 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CD82P27701 267 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 ATICP31939 592 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 HSPA9P38646 679 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 SKIV2L2P42285 1042 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 LIMS1P48059 325 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 COPB1P53618 953 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 MAPK10P53779 464 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 YWHAGP61981 247 aaKnown RBP eCLIP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 MRPL49Q13405 166 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 SURF1Q15526 300 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 GPR19Q15760 415 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 ARHGAP44Q17R89 818 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 PRR30Q53SZ7 412 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 TCP11X2Q5H9J9 407 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 RAB41Q5JT25 222 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF658Q5TYW1 1059 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 C8orf74Q6P047 294 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 SPATA4Q8NEY3 305 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 LZICQ8WZA0 190 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 SYN2Q92777 582 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CCDC127Q96BQ5 260 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 SPAG5Q96R06 1193 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 GFM1Q96RP9 751 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CDK5RAP1Q96SZ6 601 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 KLF6Q99612 283 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 DESI2Q9BSY9 194 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CPEB1Q9BZB8 566 aaKnown RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 STRADBQ9C0K7 418 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 CCDC134Q9H6E4 229 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 PCDH18Q9HCL0 1135 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 DKK3Q9UBP4 350 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 FBXO2Q9UK22 296 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 PADI4Q9UM07 663 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
CCDC60-205ENST00000546345 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
CCDC60-205ENST00000546345 TACC2O95359 2948 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 TCRBV16S1A1N1A0A5B0 115 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 BTNL10A8MVZ5 291 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 LMO7DNF2Z398 122 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 STMND1H3BQB6 276 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 CCDC188H7C350 402 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 KIAA0391O15091 583 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 POLR2DO15514 142 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 NUAK1O60285 661 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 VPS4BO75351 444 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ATP5HO75947 161 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SORBS2O94875 1100 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SNUPNO95149 360 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 VIMP08670 466 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 PRKAR1AP10644 381 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 CCL4P13236 92 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 TNNI1P19237 187 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 CFPP27918 469 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 AKT2P31751 481 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 UGT1A3P35503 534 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 MRPS35P82673 323 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ECT2LQ008S8 904 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 DYNC1I2Q13409 638 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 C1orf61Q13536 156 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ANKRD20A8PQ5CZ79 823 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF667Q5HYK9 610 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SPDYAQ5MJ70 313 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SPOPLQ6IQ16 392 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ARHGAP36Q6ZRI8 547 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 HOOK3Q86VS8 718 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SFTPA2Q8IWL1 248 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 RBM12BQ8IXT5 1001 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SYCP3Q8IZU3 236 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ARL10Q8N8L6 244 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 HJURPQ8NCD3 748 aaPredicted RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ZNF483Q8TF39 744 aaPredicted RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 DHTKD1Q96HY7 919 aaPredicted RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 SLC45A3Q96JT2 553 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 AK8Q96MA6 479 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 PWWP2AQ96N64 755 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 CATSPER2Q96P56 530 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 ERGIC2Q96RQ1 377 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 IL12RB2Q99665 862 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 UNKQ9C0B0 810 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 CASS4Q9NQ75 786 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 DTLQ9NZJ0 730 aa6.66□□□□□ -1.34
CCDC60-205ENST00000546345 APOBEC3BQ9UH17 382 aaKnown RBP6.66□□□□□ -1.34
CCDC60-205ENST00000546345 VPS4AQ9UN37 437 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms