RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 MTX2O75431 263 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 TGDSO95455 350 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 TSPAN12O95859 305 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 ACADMP11310 421 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 DGKAP23743 735 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 DNAJB13P59910 316 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 ABCE1P61221 599 aaKnown RBP19.19■□□□□ 0.66
SKP2-208ENST00000546211 OVGP1Q12889 678 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 OR4D1Q15615 310 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 CRY1Q16526 586 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 OR6Y1Q8NGX8 325 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 GATA5Q9BWX5 397 aaPredicted RBP19.19■□□□□ 0.66
SKP2-208ENST00000546211 TRIM55Q9BYV6 548 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 CD248Q9HCU0 757 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 RNF112Q9ULX5 631 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 NCKAP1Q9Y2A7 1128 aa19.19■□□□□ 0.66
SKP2-208ENST00000546211 SYCE1LA8MT33 242 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 EBAG9O00559 213 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 PLRG1O43660 514 aaKnown RBP19.18■□□□□ 0.66
SKP2-208ENST00000546211 KERAO60938 352 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 TPBGLP0DKB5 382 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 KBTBD6Q86V97 674 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 MYO1HQ8N1T3 1032 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 OR14C36Q8NHC7 312 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 FAM131CQ96AQ9 280 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 ZCCHC2Q9C0B9 1178 aaKnown RBP19.18■□□□□ 0.66
SKP2-208ENST00000546211 NPHS2Q9NP85 383 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 KLHL14Q9P2G3 628 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 CA14Q9ULX7 337 aa19.18■□□□□ 0.66
SKP2-208ENST00000546211 NPEPPSL1A6NEC2 478 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 A8MT66 165 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 CDC7O00311 574 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 KPNA5O15131 536 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 IPO13O94829 963 aaKnown RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 SOD1P00441 154 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 FTH1P02794 183 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 CBSLP0DN79 551 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 CBSP35520 551 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 NAGLUP54802 743 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 PRKCQQ04759 706 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 TMEM115Q12893 351 aaPredicted RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 TSNQ15631 228 aaKnown RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 KHDC1Q4VXA5 237 aaKnown RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 NAPRTQ6XQN6 538 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 ADHFE1Q8IWW8 467 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 EXT2Q93063 718 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 THOC1Q96FV9 657 aaKnown RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 ATOH8Q96SQ7 321 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 C20orf27Q9GZN8 174 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 ZNF395Q9H8N7 513 aaPredicted RBP19.17■□□□□ 0.66
SKP2-208ENST00000546211 NCKIPSDQ9NZQ3 722 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 FZD4Q9ULV1 537 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 ARL2BPQ9Y2Y0 163 aa19.17■□□□□ 0.66
SKP2-208ENST00000546211 NEMP2A6NFY4 417 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 K7ESM1 405 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 ITM2AO43736 263 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 LYPLA1O75608 230 aaPredicted RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 HSPA4LO95757 839 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 KCNC1P48547 511 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 RPS21P63220 83 aaKnown RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 AGERQ15109 404 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 CFAP157Q5JU67 520 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 ZNF648Q5T619 568 aaPredicted RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 KIAA1161Q6NSJ0 714 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 KIAA1324Q6UXG2 1013 aaKnown RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 TMEM92Q6UXU6 159 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 USP30Q70CQ3 517 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 RAB44Q7Z6P3 723 aaPredicted RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 PELI3Q8N2H9 469 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 CCNYL1Q8N7R7 359 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 MRGPRX1Q96LB2 322 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 PLCD4Q9BRC7 762 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 CYP4F12Q9HCS2 524 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 ARHGEF3Q9NR81 526 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 CNOT6Q9ULM6 557 aaKnown RBP19.16■□□□□ 0.66
SKP2-208ENST00000546211 SORCS3Q9UPU3 1222 aa19.16■□□□□ 0.66
SKP2-208ENST00000546211 TCRBV21S2A2A0A5A6 115 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 OR2AG2A6NM03 316 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 SUPT3HB4E1H0 165 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 UBXN8O00124 270 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 EIF3FO00303 357 aaPredicted RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 SUPT3HO75486 399 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 AOAHP28039 575 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 CCR7P32248 378 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 NFKB2Q00653 900 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 RCN2Q14257 317 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 ACSBG2Q5FVE4 666 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 HABP4Q5JVS0 413 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 SEL1L3Q68CR1 1132 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 PIWIL4Q7Z3Z4 852 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 ADAMTSL2Q86TH1 951 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 SPATS2Q86XZ4 545 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 RASGEF1AQ8N9B8 481 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 FUBP1Q96AE4 644 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 PHF21BQ96EK2 531 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 DRC3Q9H069 523 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 PREBQ9HCU5 417 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 IKZF3Q9UKT9 509 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 TMCO1Q9UM00 188 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 MRPS17Q9Y2R5 130 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms