RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 BEST1O76090 585 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CD48P09326 243 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 RBMS1P29558 406 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CHN2P52757 468 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CLDN10P78369 228 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PLOD1Q02809 727 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 NCF4Q15080 339 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ACSBG2Q5FVE4 666 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 C9orf64Q5T6V5 341 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PLD3Q8IV08 490 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PYROXD2Q8N2H3 581 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 OR4L1Q8NH43 312 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 RNASE11Q8TAA1 199 aaKnown RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 PGM2Q96G03 612 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 KLHDC7BQ96G42 594 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 LGMNQ99538 433 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 BRINP2Q9C0B6 783 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 EBF3Q9H4W6 596 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 WDR26Q9H7D7 661 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CDC14AQ9UNH5 594 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 SQORQ9Y6N5 450 aa8.53□□□□□ -1.04
CLIP1-218ENST00000545889 ZFP37Q9Y6Q3 630 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-218ENST00000545889 CNOT3O75175 753 aaKnown RBP8.52□□□□□ -1.04
CLIP1-218ENST00000545889 EPN2O95208 641 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ETS1P14921 441 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.04
CLIP1-218ENST00000545889 SPAM1P38567 509 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 CD97P48960 835 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 AIF1P55008 147 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 INCA1Q0VD86 236 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 INTS11Q5TA45 600 aaKnown RBP8.52□□□□□ -1.04
CLIP1-218ENST00000545889 N4BP2L1Q5TBK1 243 aaPredicted RBP8.52□□□□□ -1.04
CLIP1-218ENST00000545889 HECTD2Q5U5R9 776 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 TXNRD3NBQ6F5E7 133 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 FAM45BPQ6NSW5 357 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 STRADAQ7RTN6 431 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 LRRC57Q8N9N7 239 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 AVL9Q8NBF6 648 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 OR4K2Q8NGD2 314 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 OR10T2Q8NGX3 314 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF461Q8TAF7 563 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 FAM45AQ8TCE6 357 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 IRGQQ8WZA9 623 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ASB2Q96Q27 587 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 SMOQ99835 787 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF670Q9BS34 389 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 REXO4Q9GZR2 422 aaKnown RBP8.52□□□□□ -1.04
CLIP1-218ENST00000545889 C3orf14Q9HBI5 128 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ADPRHL2Q9NX46 363 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 OGDHLQ9ULD0 1010 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 PCDHGC4Q9Y5F7 938 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 ACTL7BQ9Y614 415 aa8.52□□□□□ -1.04
CLIP1-218ENST00000545889 KLHL41O60662 606 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CA3P07451 260 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CREB1P16220 341 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ATP6V1B2P21281 511 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CLCN5P51795 746 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PER3P56645 1201 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 MTAPQ13126 283 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TRIP4Q15650 581 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PLEKHG4Q58EX7 1191 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PIK3R6Q5UE93 754 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 UBE2R2Q712K3 238 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 KATNAL2Q8IYT4 538 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 MAGEB18Q96M61 343 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ROGDIQ9GZN7 287 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 LIN28AQ9H9Z2 209 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PCDH12Q9NPG4 1184 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ARMCX1Q9P291 453 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 COPS7AQ9UBW8 275 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 FBXO5Q9UKT4 447 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM150CB9EJG8 249 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 NDST3O95803 873 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TOP3BO95985 862 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 PLGP00747 810 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 JUPP14923 745 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ANPEPP15144 967 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CRATP43155 626 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 DAOAP59103 153 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ECT2LQ008S8 904 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 RPL6Q02878 288 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TTC23Q5W5X9 447 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TYW3Q6IPR3 259 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 MSANTD2Q6P1R3 559 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC81Q6ZN84 652 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 LRRC69Q6ZNQ3 347 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 SLC26A9Q7LBE3 791 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 RTN4RL1Q86UN2 441 aaPredicted RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM132CQ8N3T6 1108 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 LIX1Q8N485 282 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF366Q8N895 744 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 OR6Y1Q8NGX8 325 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 KBTBD7Q8WVZ9 684 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 TPD52L3Q96J77 140 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 KXD1Q9BQD3 176 aa8.52□□□□□ -1.05
CLIP1-218ENST00000545889 GPATCH1Q9BRR8 931 aaKnown RBP8.52□□□□□ -1.05
CLIP1-218ENST00000545889 SFXN1Q9H9B4 322 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms