RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 DUSP4Q13115 394 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 COQ5Q5HYK3 327 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 FGD3Q5JSP0 725 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 CST9Q5W186 159 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 DUS1LQ6P1R4 473 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 ELMSAN1Q6PJG2 1045 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 RNF19BQ6ZMZ0 732 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 OR56A4Q8NGH8 313 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 CD200R1Q8TD46 325 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 MUS81Q96NY9 551 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 MGME1Q9BQP7 344 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 BRINP2Q9C0B6 783 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 TUBA8Q9NY65 449 aaPredicted RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 GABRQQ9UN88 632 aa15.63■□□□□ 0.09
LDLR-204ENST00000545707 TDRKHQ9Y2W6 561 aaKnown RBP15.63■□□□□ 0.09
LDLR-204ENST00000545707 C2orf81A6NN90 581 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 H0Y858 1186 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 H3BMQ9 156 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 CBX4O00257 560 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 VPS26AO75436 327 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 CAPN1P07384 714 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 BMP1P13497 986 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 TCF3P15923 654 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 PIK3CGP48736 1102 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 IST1P53990 364 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 IL27RAQ6UWB1 636 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 LINGO4Q6UY18 593 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 TAS2R42Q7RTR8 314 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 PATL1Q86TB9 770 aaKnown RBP15.62■□□□□ 0.09
LDLR-204ENST00000545707 ITIH5Q86UX2 942 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 TBC1D21Q8IYX1 336 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 LRRC43Q8N309 656 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 DTWD1Q8N5C7 304 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 NKAPQ8N5F7 415 aaKnown RBP15.62■□□□□ 0.09
LDLR-204ENST00000545707 LINC01599Q8WXQ3 324 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 COG8Q96MW5 612 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 OSBPL6Q9BZF3 934 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 NTN4Q9HB63 628 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 TLR9Q9NR96 1032 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 IL37Q9NZH6 218 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 UBA2Q9UBT2 640 aaPredicted RBP15.62■□□□□ 0.09
LDLR-204ENST00000545707 PTBP2Q9UKA9 531 aaKnown RBP15.62■□□□□ 0.09
LDLR-204ENST00000545707 NT5C1B-RDH14C9J2C7 533 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 INSIG1O15503 277 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 VNN2O95498 520 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 MLYCDO95822 493 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 ITGB6P18564 788 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 IL2P60568 153 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 FKBP1BP68106 108 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 EMX2Q04743 252 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 PPP1R8Q12972 351 aaKnown RBP15.62■□□□□ 0.09
LDLR-204ENST00000545707 TGFBIQ15582 683 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 ATP6AP1LQ52LC2 224 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 C16orf59Q7L2K0 433 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 FAM86B1Q8N7N1 296 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 METTL6Q8TCB7 284 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 ADAMTS16Q8TE57 1224 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 SGCDQ92629 289 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 PSKH2Q96QS6 385 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 ACTL8Q9H568 366 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 SCUBE2Q9NQ36 999 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 SEPT3Q9UH03 358 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
LDLR-204ENST00000545707 FAM92AA1XBS5 289 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 TRIM64A6NGJ6 449 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 E5RI56 91 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 STX16O14662 325 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 FCGR1AP12314 374 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 EEF1B2P24534 225 aaKnown RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 GGT5P36269 586 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 GATMP50440 423 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 ZNF157P51786 506 aaPredicted RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 NUP107P57740 925 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 EEFSECP57772 596 aaKnown RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 TAF1AQ15573 450 aaPredicted RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 AARS2Q5JTZ9 985 aaKnown RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 ANKRD34AQ69YU3 496 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 XKR5Q6UX68 686 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 DLEU7Q6UYE1 221 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 DENND1CQ8IV53 801 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 GOLM1Q8NBJ4 401 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 PAPD5Q8NDF8 572 aaKnown RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 SOCS4Q8WXH5 440 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 FAM193BQ96PV7 902 aaPredicted RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 HIPK3Q9H422 1215 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 RAI2Q9Y5P3 530 aa15.61■□□□□ 0.09
LDLR-204ENST00000545707 LAMA2P24043 3122 aaKnown RBP15.61■□□□□ 0.09
LDLR-204ENST00000545707 FAM234BA2RU67 622 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 KLK8O60259 260 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 ADAMTS4O75173 837 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 GJB5O95377 273 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 PRAMEF12O95522 483 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 NFKBIAP25963 317 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 OXCT1P55809 520 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 PRKG2Q13237 762 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 RFTN2Q52LD8 501 aaPredicted RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 PDCD4Q53EL6 469 aaKnown RBP15.6■□□□□ 0.09
LDLR-204ENST00000545707 ZFAND4Q86XD8 727 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 HID1Q8IV36 788 aa15.6■□□□□ 0.09
LDLR-204ENST00000545707 NAT16Q8N8M0 369 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms