RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 KCTD14Q9BQ13 255 aaPredicted RBP23.01■■□□□ 1.27
FOXA1-202ENST00000545425 MRPL9Q9BYD2 267 aaKnown RBP23.01■■□□□ 1.27
FOXA1-202ENST00000545425 CCSER2Q9H7U1 834 aa23.01■■□□□ 1.27
FOXA1-202ENST00000545425 SEMA4BQ9NPR2 832 aaPredicted RBP23.01■■□□□ 1.27
FOXA1-202ENST00000545425 ANAPC2Q9UJX6 822 aa23.01■■□□□ 1.27
FOXA1-202ENST00000545425 ZFP37Q9Y6Q3 630 aaPredicted RBP23.01■■□□□ 1.27
FOXA1-202ENST00000545425 MSH3P20585 1137 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 POLR2JP52435 117 aaKnown RBP23■■□□□ 1.27
FOXA1-202ENST00000545425 PCBP2Q15366 365 aaKnown RBP eCLIP23■■□□□ 1.274e-10■■■■□ 21.4
FOXA1-202ENST00000545425 CYTH1Q15438 398 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 SYVN1Q86TM6 617 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 MYO1HQ8N1T3 1032 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 OR7D4Q8NG98 312 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 LZICQ8WZA0 190 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 SLC39A3Q9BRY0 314 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 HSFX1Q9UBD0 423 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 PCDHGB4Q9UN71 923 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 FAM50BQ9Y247 325 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 PCDHGB5Q9Y5G0 923 aa23■■□□□ 1.27
FOXA1-202ENST00000545425 ARNTLO00327 626 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 STX7O15400 261 aaKnown RBP22.99■■□□□ 1.27
FOXA1-202ENST00000545425 LATS1O95835 1130 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 TSPAN12O95859 305 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 PRLP01236 227 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 GSK3BP49841 420 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 SCNN1BP51168 640 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 EMX2Q04743 252 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 PRKG2Q13237 762 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 PTPRCAPQ14761 206 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 FUT10Q6P4F1 479 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 C16orf59Q7L2K0 433 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 ARHGAP22Q7Z5H3 698 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 ADAMTSL2Q86TH1 951 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 SPPL2CQ8IUH8 684 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 MDGA1Q8NFP4 955 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 ADI1Q9BV57 179 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 MAGEL2Q9UJ55 1249 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 AURKCQ9UQB9 309 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 ZNF711Q9Y462 761 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 RAI2Q9Y5P3 530 aa22.99■■□□□ 1.27
FOXA1-202ENST00000545425 A0A0D9SEW6 157 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 ANKRD66B4E2M5 251 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CDC7O00311 574 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 PPP6CO00743 305 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SOCS2O14508 198 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 TULP3O75386 442 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SLC6A4P31645 630 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 MERTKQ12866 999 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 RBBP7Q16576 425 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 ATP6AP1LQ52LC2 224 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 INO80DQ53TQ3 878 aaPredicted RBP22.98■■□□□ 1.27
FOXA1-202ENST00000545425 TMEM240Q5SV17 173 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 HECTD3Q5T447 861 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 RNF19BQ6ZMZ0 732 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 FIBCD1Q8N539 461 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CD200R1Q8TD46 325 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 KCNA7Q96RP8 456 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SPON2Q9BUD6 331 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 LRRC3Q9BY71 257 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 GPR62Q9BZJ7 368 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CAAP1Q9H8G2 361 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 BTRCQ9Y297 605 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SLC27A5Q9Y2P5 690 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 PCDHB7Q9Y5E2 793 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 NPEPPSL1A6NEC2 478 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 LRRC14BA6NHZ5 514 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 TRMUO75648 421 aaKnown RBP22.98■■□□□ 1.27
FOXA1-202ENST00000545425 F11P03951 625 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 MC4RP32245 332 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 RFC2P35250 354 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 KCNQ1P51787 676 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SMAD3P84022 425 aaKnown RBP22.98■■□□□ 1.27
FOXA1-202ENST00000545425 LIPEQ05469 1076 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CACNG1Q06432 222 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 SLC36A3Q495N2 470 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 ZFAND4Q86XD8 727 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 HID1Q8IV36 788 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CBR4Q8N4T8 237 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 GPR152Q8TDT2 470 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 MYEOVQ96EZ4 313 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 MTIF3Q9H2K0 278 aaKnown RBP22.98■■□□□ 1.27
FOXA1-202ENST00000545425 MARCH5Q9NX47 278 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CD274Q9NZQ7 290 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 CIDEBQ9UHD4 219 aa22.98■■□□□ 1.27
FOXA1-202ENST00000545425 TCRBV5S2A0A599 114 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 E2F3O00716 465 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 VNN2O95498 520 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 FGBP02675 491 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 S100BP04271 92 aaPredicted RBP22.97■■□□□ 1.27
FOXA1-202ENST00000545425 PIRTP0C851 137 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 ACRP10323 421 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 RPS3P23396 243 aaKnown RBP eCLIP22.97■■□□□ 1.27
FOXA1-202ENST00000545425 ARPP19P56211 112 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 MBTPS1Q14703 1052 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 CRY1Q16526 586 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 TTC30BQ8N4P2 665 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 PNPT1Q8TCS8 783 aaKnown RBP22.97■■□□□ 1.27
FOXA1-202ENST00000545425 LINGO1Q96FE5 620 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 NACA2Q9H009 215 aa22.97■■□□□ 1.27
FOXA1-202ENST00000545425 IL1RL2Q9HB29 575 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms