RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	MYOM1	P52179	1685 aa		4.1	□□□□□ -1.75
SNHG1-222	ENST00000545308	ALS2	Q96Q42	1657 aa		4.1	□□□□□ -1.75
SNHG1-222	ENST00000545308	MAGEB17	A8MXT2	336 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	TLX3	O43711	291 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ATG13	O75143	517 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	RSL1D1	O76021	490 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	KCNK5	O95279	499 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ATP5F1	P24539	256 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PIGA	P37287	484 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	EIF2S3	P41091	472 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PRCP	P42785	496 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CCR10	P46092	362 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	POLG	P54098	1239 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	RPS13	P62277	151 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ADORA2A-AS1	P86434	159 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PLIN5	Q00G26	463 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	GAD2	Q05329	585 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SREBF2	Q12772	1141 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PNLIPRP3	Q17RR3	467 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CST9LP1	Q5W188	147 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CAVIN1	Q6NZI2	390 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	MIS18BP1	Q6P0N0	1132 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZNF793	Q6ZN11	406 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SPATA6L	Q8N4H0	392 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SCCPDH	Q8NBX0	429 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	RBM15B	Q8NDT2	890 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	MCU	Q8NE86	351 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	AGBL3	Q8NEM8	1001 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ENGASE	Q8NFI3	743 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CFAP61	Q8NHU2	1237 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PIGO	Q8TEQ8	1089 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SIGLEC11	Q96RL6	698 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	FNBP1	Q96RU3	617 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	POLDIP3	Q9BY77	421 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SPATC1L	Q9H0A9	340 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SLCO5A1	Q9H2Y9	848 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	PPP1R3E	Q9H7J1	279 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	EPB41L5	Q9HCM4	733 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	TMEM184C	Q9NVA4	438 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CHCHD3	Q9NX63	227 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	SLC9A2	Q9UBY0	812 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	BTBD3	Q9Y2F9	522 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	RAI2	Q9Y5P3	530 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	BRD4	O60885	1362 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	CRB1	P82279	1406 aa		4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-222	ENST00000545308	ITSN1	Q15811	1721 aa		4.09	□□□□□ -1.76
SNHG1-222	ENST00000545308	CPED1	A4D0V7	1026 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZNF814	B7Z6K7	855 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	SMAD9	O15198	467 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	CPD	O75976	1380 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	RECQL5	O94762	991 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	MTA2	O94776	668 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	NDUFB4	O95168	129 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZWINT	O95229	277 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	G6PD	P11413	515 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	CHRNB2	P17787	502 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	MAOA	P21397	527 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	HOXD9	P28356	352 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	HOXC8	P31273	242 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	ATP7B	P35670	1465 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	NPY4R	P50391	375 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	METAP2	P50579	478 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	CDH13	P55290	713 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	GHRHR	Q02643	423 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	QSER1	Q2KHR3	1735 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	HYAL4	Q2M3T9	481 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	MPP7	Q5T2T1	576 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	C6orf163	Q5TEZ5	329 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	SIGIRR	Q6IA17	410 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	TMEM211	Q6ICI0	200 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	TEX38	Q6PEX7	206 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	SSH2	Q76I76	1423 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	LDB1	Q86U70	411 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	METTL23	Q86XA0	190 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	IQCA1	Q86XH1	822 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	CEP57	Q86XR8	500 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	EPHX4	Q8IUS5	362 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	GALNT16	Q8N428	558 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	KCNH5	Q8NCM2	988 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	SLC44A5	Q8NCS7	719 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	OR10S1	Q8NGN2	331 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	DEPDC1B	Q8WUY9	529 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	PRAM1	Q96QH2	718 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	FAM118B	Q9BPY3	351 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	HGH1	Q9BTY7	390 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	KRTAP1-5	Q9BYS1	174 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	RTN4R	Q9BZR6	473 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	C2orf40	Q9H1Z8	148 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	MMP27	Q9H306	513 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	DNAJC18	Q9H819	358 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	FLRT1	Q9NZU1	646 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	DNAJB9	Q9UBS3	223 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	HACL1	Q9UJ83	578 aa		4.08	□□□□□ -1.76
SNHG1-222	ENST00000545308	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms