RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZG16O60844 167 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF821O75541 412 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CEACAM4O75871 244 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 NDUFA10O95299 355 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ADCY5O95622 1261 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 AMY2AP04746 511 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ALPPP05187 535 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 UGT2B4P06133 528 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GLI1P08151 1106 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ANKRD34CP0C6C1 535 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TRIM49P0CI25 452 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TRIM49CP0CI26 452 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CD99P14209 185 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CPEP16870 476 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 AMY2BP19961 511 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 LPOP22079 712 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RPL13P26373 211 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 OR1E1P30953 314 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CSF2RBP32927 897 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 PSMC2P35998 433 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 FASLGP48023 281 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RPL34P49207 117 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CDKN1CP49918 316 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 MXI1P50539 228 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SCNN1BP51168 640 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CCL11P51671 97 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RRADP55042 308 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RPS15P62841 145 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 FOXM1Q08050 763 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 PPP3CAQ08209 521 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 EIF4EBP2Q13542 120 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 DNASE1L3Q13609 305 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 IL11RAQ14626 422 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GRM3Q14832 879 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 NFIL3Q16649 462 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SKOR2Q2VWA4 1001 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 VWA2Q5GFL6 755 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 C1orf220Q5T0J3 134 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 LYPLAL1Q5VWZ2 237 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SYPL2Q5VXT5 272 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 NKAIN2Q5VXU1 208 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ERAP2Q6P179 960 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GDPD4Q6W3E5 623 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TAOK1Q7L7X3 1001 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM135Q86UB9 458 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 XYLT1Q86Y38 959 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 RASGRP3Q8IV61 690 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 FAM186BQ8IYM0 893 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 NXPE1Q8N323 547 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GUF1Q8N442 669 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CISD2Q8N5K1 135 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 NUP43Q8NFH3 380 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 OR2AP1Q8NGE2 309 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 OR2W6PQ8NHA6 318 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 HCAR2Q8TDS4 363 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 OR1E3Q8WZA6 343 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SH3KBP1Q96B97 665 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 C19orf60Q96EN9 201 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 EEF2KMTQ96G04 330 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 KLHL32Q96NJ5 620 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CLIC6Q96NY7 704 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 AGAP3Q96P47 875 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 KCNJ15Q99712 375 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TM6SF2Q9BZW4 377 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ILKAPQ9H0C8 392 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ZSCAN16Q9H4T2 348 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 THAP9Q9H5L6 903 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 WDR26Q9H7D7 661 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 MMRN2Q9H8L6 949 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 APMAPQ9HDC9 416 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SLC6A20Q9NP91 592 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 LHX9Q9NQ69 397 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 CATSPERZQ9NTU4 200 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 SPATS2LQ9NUQ6 558 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 ASF1BQ9NVP2 202 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 DDIT4Q9NX09 232 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 DDX56Q9NY93 547 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 GPR83Q9NYM4 423 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM9Q9P0T7 183 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 LUZP4Q9P127 313 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TAAR2Q9P1P5 351 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 USP25Q9UHP3 1055 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 MOSPD1Q9UJG1 213 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 HPCAL4Q9UM19 191 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 B3GNT3Q9Y2A9 372 aa4.06□□□□□ -1.76
SNHG1-220ENST00000544550 COA3Q9Y2R0 106 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 COPG1Q9Y678 874 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 TLN1Q9Y490 2541 aaKnown RBP4.06□□□□□ -1.76
SNHG1-220ENST00000544550 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 NYNRINQ9P2P1 1898 aaKnown RBP4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ICE1Q9Y2F5 2266 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 SYNJ2BP-COX16A0A087WUM0 186 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 A0A0D9SEW6 157 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TMEM202A6NGA9 273 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 ARGFXA6NJG6 315 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 A8MU76 341 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 PPM1DO15297 605 aa4.05□□□□□ -1.76
SNHG1-220ENST00000544550 TOX3O15405 576 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms