RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 FARSAQ9Y285 508 aaKnown RBP15.18■□□□□ 0.02
CD4-212ENST00000544344 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
CD4-212ENST00000544344 PCDHGB7Q9Y5F8 929 aa15.18■□□□□ 0.02
CD4-212ENST00000544344 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 MTX2O75431 263 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 CA4P22748 312 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 CCNCP24863 283 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 DCDC1P59894 354 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 RPS15P62841 145 aaKnown RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 GPS2Q13227 327 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 SLC6A19Q695T7 634 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 TIGD7Q6NT04 549 aaPredicted RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 CYB5D1Q6P9G0 228 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 LRRTM4Q86VH4 590 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 BPHLQ86WA6 291 aaPredicted RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 RBM12BQ8IXT5 1001 aaKnown RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 TRAM1L1Q8N609 369 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 NIPA2Q8N8Q9 360 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 SIDT2Q8NBJ9 832 aaKnown RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 SLC38A9Q8NBW4 561 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 FDCSPQ8NFU4 85 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 GPR150Q8NGU9 434 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 C19orf60Q96EN9 201 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 ZSCAN5AQ9BUG6 496 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 NUP85Q9BW27 656 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 NUDT9Q9BW91 350 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 MFRPQ9BY79 579 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 MRPL47Q9HD33 250 aaKnown RBP15.17■□□□□ 0.02
CD4-212ENST00000544344 FGF21Q9NSA1 209 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 ZNF451Q9Y4E5 1061 aa15.17■□□□□ 0.02
CD4-212ENST00000544344 SPTBP11277 2137 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 CSMD1Q96PZ7 3565 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 KRT86O43790 486 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 JCHAINP01591 159 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 FECHP22830 423 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 GALNT3Q14435 633 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 PIGHQ14442 188 aaPredicted RBP15.16■□□□□ 0.02
CD4-212ENST00000544344 IFI16Q16666 785 aaKnown RBP15.16■□□□□ 0.02
CD4-212ENST00000544344 IZUMO3Q5VZ72 239 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 LCN10Q6JVE6 187 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 TMC3Q7Z5M5 1100 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 PNPLA2Q96AD5 504 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 CXorf40BQ96DE9 158 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 ZNF514Q96K75 400 aaPredicted RBP15.16■□□□□ 0.02
CD4-212ENST00000544344 BTBD6Q96KE9 485 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 MAP3K3Q99759 626 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 ZFYVE1Q9HBF4 777 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 TRIM10Q9UDY6 481 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 OTOGQ6ZRI0 2925 aa15.16■□□□□ 0.02
CD4-212ENST00000544344 DPM1O60762 260 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 CBX6O95503 412 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 PIRTP0C851 137 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 MYBL1P10243 752 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 IDSP22304 550 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 PRKCIP41743 596 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 CD86P42081 329 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 ACY1Q03154 408 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 DPYSL3Q14195 570 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 FAM182AQ5T1J6 154 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 FAM69BQ5VUD6 431 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 PDPK2PQ6A1A2 396 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 D2HGDHQ8N465 521 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 CNTD1Q8N815 330 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 ANKRD20A12PQ8NF67 263 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 SLC29A3Q9BZD2 475 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 CHST8Q9H2A9 424 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 SLAMF7Q9NQ25 335 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 AIPL1Q9NZN9 384 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
CD4-212ENST00000544344 SSU72P8A0A1W2PR75 194 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 VEGFDO43915 354 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 CPNE3O75131 537 aaKnown RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 SCRG1O75711 98 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 TMEM63AO94886 807 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 CDK14O94921 469 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 BPIP17213 487 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 ITGA1P56199 1179 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 MYL5Q02045 173 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 GBE1Q04446 702 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 SLC10A2Q12908 348 aaPredicted RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 KRT81Q14533 505 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 NR6A1Q15406 480 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 ASIC2Q16515 512 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 ATP13A4Q4VNC1 1196 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 PLEKHS1Q5SXH7 462 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 C1QL3Q5VWW1 255 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 RBM43Q6ZSC3 357 aaKnown RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 KMT5CQ86Y97 462 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 MR1Q95460 341 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 ZNF501Q96CX3 271 aaPredicted RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 SNRNP40Q96DI7 357 aaKnown RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 TRIM11Q96F44 468 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 SMAD5Q99717 465 aaKnown RBP15.14■□□□□ 0.01
CD4-212ENST00000544344 POLEQ07864 2286 aa15.14■□□□□ 0.01
CD4-212ENST00000544344 FBN2P35556 2912 aa15.13■□□□□ 0.01
CD4-212ENST00000544344 CAPN1P07384 714 aa15.13■□□□□ 0.01
CD4-212ENST00000544344 POU3F2P20265 443 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms