RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CEP41Q9BYV8 373 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 BRD8Q9H0E9 1235 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 SLC25A51Q9H1U9 297 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 PDE7BQ9NP56 450 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 LHX9Q9NQ69 397 aa22.21■■□□□ 1.15
CDKN3-207ENST00000543789 LUC7L2Q9Y383 392 aaKnown RBP22.21■■□□□ 1.15
CDKN3-207ENST00000543789 H2AFZP0C0S5 128 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 CASP14P31944 242 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 ANP32AP39687 249 aaKnown RBP22.2■■□□□ 1.14
CDKN3-207ENST00000543789 FANCCQ00597 558 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 TMEM115Q12893 351 aaPredicted RBP22.2■■□□□ 1.14
CDKN3-207ENST00000543789 PDK1Q15118 436 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 H2AFVQ71UI9 128 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.2■■□□□ 1.14
CDKN3-207ENST00000543789 TADA1Q96BN2 335 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 IQCDQ96DY2 449 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 VPS35Q96QK1 796 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 MAK16Q9BXY0 300 aaKnown RBP22.2■■□□□ 1.14
CDKN3-207ENST00000543789 XPO4Q9C0E2 1151 aaKnown RBP22.2■■□□□ 1.14
CDKN3-207ENST00000543789 CBX8Q9HC52 389 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 WDR37Q9Y2I8 494 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 LRRK2Q5S007 2527 aa22.2■■□□□ 1.14
CDKN3-207ENST00000543789 C21orf140B9A014 251 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 HALP42357 657 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 GTF2H3Q13889 308 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 SLC14A2Q15849 920 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 C11orf96Q7Z7L8 435 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 TRAPPC5Q8IUR0 188 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 APLFQ8IW19 511 aaPredicted RBP22.19■■□□□ 1.14
CDKN3-207ENST00000543789 BRSK1Q8TDC3 778 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 CT55Q8WUE5 264 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 CTNNBL1Q8WYA6 563 aaPredicted RBP22.19■■□□□ 1.14
CDKN3-207ENST00000543789 UBXN4Q92575 508 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 FCRL4Q96PJ5 515 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 SEMA5BQ9P283 1151 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 RARRES3Q9UL19 164 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 TMPRSS11EQ9UL52 423 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 NENFQ9UMX5 172 aa22.19■■□□□ 1.14
CDKN3-207ENST00000543789 LRRD1A4D1F6 860 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 BLACEA4D250 179 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 ZNF487B1APH4 448 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 AURKAO14965 403 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 KCNJ13O60928 360 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 NDST3O95803 873 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 UBASH3AP57075 661 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 ATP13A5Q4VNC0 1218 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 SLC9A4Q6AI14 798 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 BPHLQ86WA6 291 aaPredicted RBP22.18■■□□□ 1.14
CDKN3-207ENST00000543789 SIDT2Q8NBJ9 832 aaKnown RBP22.18■■□□□ 1.14
CDKN3-207ENST00000543789 SPATA22Q8NHS9 363 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 GDAP1Q8TB36 358 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 SLC41A2Q96JW4 573 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 TTC25Q96NG3 672 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 LRRC4CQ9HCJ2 640 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 BPIFA1Q9NP55 256 aa22.18■■□□□ 1.14
CDKN3-207ENST00000543789 IGHV5-51A0A0C4DH38 117 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 APOL1O14791 398 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 TIAF1O95411 115 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 MT-CYBP00156 380 aaPredicted RBP22.17■■□□□ 1.14
CDKN3-207ENST00000543789 FOLR1P15328 257 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 TPM4P67936 248 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 TUBB3Q13509 450 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 SEMA5AQ13591 1074 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 PWWP2BQ6NUJ5 590 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 KLHL35Q6PF15 583 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 LURAP1LQ8IV03 231 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 SEC14L1Q92503 715 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 GPR87Q9BY21 358 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 ACTL8Q9H568 366 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 SPO11Q9Y5K1 396 aa22.17■■□□□ 1.14
CDKN3-207ENST00000543789 PPP1R12AO14974 1030 aaPredicted RBP22.16■■□□□ 1.14
CDKN3-207ENST00000543789 PDGFAP04085 211 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 ZFXP17010 805 aaPredicted RBP22.16■■□□□ 1.14
CDKN3-207ENST00000543789 FECHP22830 423 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 PPP1CAP62136 330 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 ACY1Q03154 408 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 MESDQ14696 234 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 C4orf17Q53FE4 359 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 TEX44Q53QW1 395 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 AMZ2Q86W34 360 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 VSIG1Q86XK7 387 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 OLFM3Q96PB7 478 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 PACSIN1Q9BY11 444 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 GLOD4Q9HC38 313 aa22.16■■□□□ 1.14
CDKN3-207ENST00000543789 C3orf70A6NLC5 250 aaPredicted RBP22.15■■□□□ 1.14
CDKN3-207ENST00000543789 TTLL8A6PVC2 850 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 VPS4BO75351 444 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 PMPCBO75439 489 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 POP7O75817 140 aaKnown RBP22.15■■□□□ 1.14
CDKN3-207ENST00000543789 DNAJB5O75953 348 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 HMGCLP35914 325 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 ARL4DP49703 201 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 KCNAB1Q14722 419 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 RPE65Q16518 533 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 ZDHHC20Q5W0Z9 365 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 NPNTQ6UXI9 565 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 THAP4Q8WY91 577 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 TRIM55Q9BYV6 548 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 TRABDQ9H4I3 376 aa22.15■■□□□ 1.14
CDKN3-207ENST00000543789 AKIRIN1Q9H9L7 192 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms