RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
VPS33A-208ENST00000543633 CENPFP49454 3210 aa13.59□□□□□ -0.23
VPS33A-208ENST00000543633 H0Y858 1186 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 CLPXO76031 633 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 SERPINF2P08697 491 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 GGT1P19440 569 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 OR4D2P58180 307 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 SMU1Q2TAY7 513 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 ALFQ53S48 1182 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 C6orf136Q5SQH8 315 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 FAM219BQ5XKK7 198 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 OR13C4Q8NGS5 318 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 TANKQ92844 425 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 SDCCAG3Q96C92 435 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 RNF145Q96MT1 663 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 TRIB3Q96RU7 358 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 UGT2B28Q9BY64 529 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 ING2Q9H160 280 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 GORASP2Q9H8Y8 452 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 FANCEQ9HB96 536 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 TLR9Q9NR96 1032 aa13.58□□□□□ -0.24
VPS33A-208ENST00000543633 VPS26AO75436 327 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CNTN5O94779 1100 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ZBTB11O95625 1053 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 OCM2P0CE71 109 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CRHBPP24387 322 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CBX3Q13185 183 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 RBBP7Q16576 425 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ANKDD1AQ495B1 522 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 PRAMEF19Q5SWL8 479 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 XAF1Q6GPH4 301 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 C16orf87Q6PH81 154 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 DLEU7Q6UYE1 221 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 RNF165Q6ZSG1 346 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 PNPLA1Q8N8W4 532 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 PROKR1Q8TCW9 393 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TMEM74Q96NL1 305 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 MUS81Q96NY9 551 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 INTS7Q9NVH2 962 aaKnown RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 NUDT4Q9NZJ9 180 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 COQ6Q9Y2Z9 468 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TIMM22Q9Y584 194 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ST14Q9Y5Y6 855 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SCN10AQ9Y5Y9 1956 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 A0A1B0GTL3 188 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 UBA6A0AVT1 1052 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 INPPL1O15357 1258 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CA12O43570 354 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SYNCRIPO60506 623 aaKnown RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 NDUFS3O75489 264 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 GMNNO75496 209 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SULT1C4O75897 302 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 IGLV3-27P01718 113 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 IGHA2P01877 340 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CD247P20963 164 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 JAK1P23458 1154 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CTGFP29279 349 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 IL12AP29459 219 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SHMT2P34897 504 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 BMXP51813 675 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 MGAT3Q09327 533 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 BNIP3Q12983 259 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 PWP1Q13610 501 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TAF1AQ15573 450 aaPredicted RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TGFBIQ15582 683 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 FUT11Q495W5 492 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 GTF2IRD2BQ6EKJ0 949 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TBPL2Q6SJ96 375 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 GTF2IRD2Q86UP8 949 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 OR2T11Q8NH01 316 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SNX19Q92543 992 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 TMBIM1Q969X1 311 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 SEPHS2Q99611 448 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 CGREF1Q99674 301 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 MGME1Q9BQP7 344 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 NAA50Q9GZZ1 169 aaKnown RBP13.57□□□□□ -0.24
VPS33A-208ENST00000543633 IL37Q9NZH6 218 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 DNAJB9Q9UBS3 223 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 NAALAD2Q9Y3Q0 740 aa13.57□□□□□ -0.24
VPS33A-208ENST00000543633 NPEPPSL1A6NEC2 478 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 E2F3O00716 465 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 MATN1P21941 496 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 CES1P23141 567 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 TPP2P29144 1249 aaPredicted RBP13.56□□□□□ -0.24
VPS33A-208ENST00000543633 ETFBP38117 255 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 MAGEA11P43364 429 aa13.56□□□□□ -0.24
VPS33A-208ENST00000543633 BCAP31P51572 246 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms