RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IPO13O94829 963 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 HLA-DQA2P01906 255 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 VHLP40337 213 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PBX1P40424 430 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PTGER3P43115 390 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ZMYND11Q15326 602 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 DPYSL2Q16555 572 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CCNYL2Q5T2Q4 361 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 LDB1Q86U70 411 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 TWNKQ96RR1 684 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MCMBPQ9BTE3 642 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CEP44Q9C0F1 390 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 NKX2-4Q9H2Z4 354 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SMOC2Q9H3U7 446 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 DDX18Q9NVP1 670 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ARMCX1Q9P291 453 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 M0R2N6 131 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SERPINB7O75635 380 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 LRATO95237 230 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CHRNA1P02708 482 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 IL5RAQ01344 420 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 TAF1AQ15573 450 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MFSD5Q6N075 450 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM46DQ8NEK8 389 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MFSD3Q96ES6 412 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 C1orf50Q9BV19 199 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 RAB11FIP5Q9BXF6 653 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 BRINP2Q9C0B6 783 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 EPB41L4BQ9H329 900 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ERVK-5Q9HDB9 667 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 NCDNQ9UBB6 729 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CORO1CQ9ULV4 474 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDHGB3Q9Y5G1 929 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MYADML2A6NDP7 307 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 HMX3A6NHT5 357 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SAC3D1A6NKF1 404 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 LEFTY2O00292 366 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MAN1A2O60476 641 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 FKBP6O75344 327 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 UBOX5O94941 541 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 TIMP1P01033 207 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ACP5P13686 325 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ALDH4A1P30038 563 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 BMPR1AP36894 532 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 TM4SF4P48230 202 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 BST1Q10588 318 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SQLEQ14534 574 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC35G1Q2M3R5 365 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF549Q6P9A3 640 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CYP2R1Q6VVX0 501 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 GCNT7Q6ZNI0 430 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 OSTM1Q86WC4 334 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 UNC5BQ8IZJ1 945 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 C12orf76Q8N812 135 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ANKLE1Q8NAG6 615 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 AVL9Q8NBF6 648 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF784Q8NCA9 323 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 OR52L1Q8NGH7 329 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ST7LQ8TDW4 575 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SETD7Q8WTS6 366 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MUL1Q969V5 352 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CNBD2Q96M20 576 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CDRT15Q96T59 188 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 KXD1Q9BQD3 176 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PCBD2Q9H0N5 130 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SDCBP2Q9H190 292 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PIGVQ9NUD9 493 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 DTLQ9NZJ0 730 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SIRPGQ9P1W8 387 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 COG5Q9UP83 839 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 B4DGG1 531 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 RFXANKO14593 260 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 GOT2P00505 430 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 COL6A2P12110 1019 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 NDUFS1P28331 727 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 GSSP48637 474 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MLLT6P55198 1093 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SEMG2Q02383 582 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CAMK2DQ13557 499 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 LAPTM5Q13571 262 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ADAMTS15Q8TE58 950 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF845Q96IR2 970 aaPredicted RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 APOLD1Q96LR9 279 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PCYT2Q99447 389 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CIDEBQ9UHD4 219 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 GRIN2DO15399 1336 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 ADAMTS3O15072 1205 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PDE9AO76083 593 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 PSMC3P17980 439 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 IGFALSP35858 605 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 BNC1Q01954 994 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 MTAPQ13126 283 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 RBM18Q96H35 190 aaKnown RBP6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 CYP2S1Q96SQ9 504 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 P2RY13Q9BPV8 354 aa6.83□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC7A4O43246 635 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 OR1F1O43749 312 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms