RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF765Q7L2R6 523 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 LSMEM2Q8N112 164 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 DDHD1Q8NEL9 900 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 LKAAEAR1Q8TD35 194 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 EEF1AKMT1Q8WVE0 214 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 RAB7BQ96AH8 199 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 PANX3Q96QZ0 392 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 ACOX2Q99424 681 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 TRMOQ9BU70 441 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 MYLK2Q9H1R3 596 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 DYRK4Q9NR20 520 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 CACNA2D2Q9NY47 1150 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 HEY2Q9UBP5 337 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 CD84Q9UIB8 345 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 IKZF3Q9UKT9 509 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 CKAP5Q14008 2032 aa9.21□□□□□ -0.93
GNE-206ENST00000543356 NPEPPSL1A6NEC2 478 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 TNRC18O15417 2968 aaPredicted RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 KLK8O60259 260 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 MAGEC1O60732 1142 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 SLC25A14O95258 325 aaPredicted RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 CHRNGP07510 517 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 MTHFD2P13995 350 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 SOX9P48436 509 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 GALK1P51570 392 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 HERVK_113P63132 956 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 CREB5Q02930 508 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 BNIP1Q12981 228 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 CAMK2GQ13555 558 aaPredicted RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 TSNQ15631 228 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 SPRED3Q2MJR0 410 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 ZNF284Q2VY69 593 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 CFAP157Q5JU67 520 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 FAM91A1Q658Y4 838 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 FRMD7Q6ZUT3 714 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 ERN2Q76MJ5 926 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 MAVSQ7Z434 540 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 ZBTB2Q8N680 514 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 CLDN19Q8N6F1 224 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 CCNYL1Q8N7R7 359 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 FUBP1Q96AE4 644 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 ERP27Q96DN0 273 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 DTD2Q96FN9 168 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 RIOK2Q9BVS4 552 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 ERVK-6Q9BXR3 956 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 RSPH9Q9H1X1 276 aaPredicted RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 ABCG8Q9H221 673 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 FBRSL1Q9HCM7 1045 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 CYP4F12Q9HCS2 524 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.94
GNE-206ENST00000543356 RNF112Q9ULX5 631 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 ITM2BQ9Y287 266 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 REV3LO60673 3130 aa9.21□□□□□ -0.94
GNE-206ENST00000543356 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SLCO1B7G3V0H7 640 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 K7EQS6 105 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 UBXN8O00124 270 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 EIF3FO00303 357 aaPredicted RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 CDC7O00311 574 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 BTN3A1O00481 513 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 WNT9AO14904 365 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
GNE-206ENST00000543356 AP2A2O94973 939 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 FESP07332 822 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 OR56A5P0C7T3 313 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 CBSLP0DN79 551 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 DGKAP23743 735 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 MPSTP25325 297 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 CBSP35520 551 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 KIR2DL1P43626 348 aaPredicted RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 PSMD8P48556 350 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 RGS4P49798 205 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 RPL14P50914 215 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 NAA20P61599 178 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 ACOX1Q15067 660 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 TTLL9Q3SXZ7 439 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 ZNF678Q5SXM1 525 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 MMAAQ8IVH4 418 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 PTGR2Q8N8N7 351 aaPredicted RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 KCNV2Q8TDN2 545 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SCAMP4Q969E2 229 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 GSTO2Q9H4Y5 243 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 EML4Q9HC35 981 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 ZFP69BQ9UJL9 534 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 FADS2P1A8MWK0 482 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SUPT3HB4E1H0 165 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SPECC1L-ADORA2AF8WAN1 911 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 STX16-NPEPL1H3BU86 382 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 STX16O14662 325 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 AHCYL1O43865 530 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SUPT3HO75486 399 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 IGFBP4P22692 258 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SERPINB3P29508 390 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 CTHP32929 405 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 SCTRP47872 440 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 RGS19P49795 217 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms