RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 C16orf96A6NNT2 1141 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 BTN3A1O00481 513 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 COQ9O75208 318 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 MLYCDO95822 493 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 NPPAP01160 153 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 ANXA6P08133 673 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 CDH3P22223 829 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 GSTM2P28161 218 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 MTHFRP42898 656 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 PLA2G16P53816 162 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 MLLT10P55197 1068 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 TBX4P57082 545 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 PRKG2Q13237 762 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 CBX2Q14781 532 aaPredicted RBP12.8□□□□□ -0.36
DDX11-223ENST00000542838 MAPRE1Q15691 268 aaKnown RBP12.8□□□□□ -0.36
DDX11-223ENST00000542838 FXNQ16595 210 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 IMPG1Q17R60 797 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 SETMARQ53H47 684 aaPredicted RBP12.8□□□□□ -0.36
DDX11-223ENST00000542838 C6orf136Q5SQH8 315 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 LDLRAP1Q5SW96 308 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 ZFAND4Q86XD8 727 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 FUBP1Q96AE4 644 aaKnown RBP12.8□□□□□ -0.36
DDX11-223ENST00000542838 SLC10A4Q96EP9 437 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 TDRD1Q9BXT4 1180 aaKnown RBP12.8□□□□□ -0.36
DDX11-223ENST00000542838 TOR3AQ9H497 397 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 PCDHGA4Q9Y5G9 962 aa12.8□□□□□ -0.36
DDX11-223ENST00000542838 M0QZ92 97 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 OR4F21O95013 312 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 CYP11A1P05108 521 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 PLIN5Q00G26 463 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
DDX11-223ENST00000542838 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 PLEKHH3Q7Z736 793 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 IGFN1Q86VF2 1251 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 ZNF683Q8IZ20 524 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 SPARTQ8N0X7 666 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 OR56A4Q8NGH8 313 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 PEX13Q92968 403 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 SDCCAG3Q96C92 435 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 CDKN2AIPNLQ96HQ2 116 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GPR21Q99679 349 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 TLR6Q9Y2C9 796 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 PATJQ8NI35 1801 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 STX16O14662 325 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 NR4A1P22736 598 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 ARL1P40616 181 aaPredicted RBP12.79□□□□□ -0.36
DDX11-223ENST00000542838 TYSND1Q2T9J0 566 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 TTC23Q5W5X9 447 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 ZDHHC13Q8IUH4 622 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 CCDC138Q96M89 665 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 POLR1EQ9GZS1 481 aaKnown RBP12.79□□□□□ -0.36
DDX11-223ENST00000542838 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 MED16Q9Y2X0 877 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 DGKBQ9Y6T7 804 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GBF1Q92538 1859 aa12.79□□□□□ -0.36
DDX11-223ENST00000542838 GMNNO75496 209 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 PRSS23O95084 383 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 CTSHP09668 335 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 IL10RBQ08334 325 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 MEP1AQ16819 746 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 TXNDC11Q6PKC3 985 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 DLEU7Q6UYE1 221 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 CIR1Q86X95 450 aaPredicted RBP12.78□□□□□ -0.36
DDX11-223ENST00000542838 TMCO5AQ8N6Q1 288 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
DDX11-223ENST00000542838 IGSF8Q969P0 613 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 SLC39A13Q96H72 371 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 SMURF2Q9HAU4 748 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 G3V2T6 193 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 MUSKO15146 869 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 NDUFS3O75489 264 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 PBX3P40426 434 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 IST1P53990 364 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 MRPS6P82932 125 aaKnown RBP12.78□□□□□ -0.36
DDX11-223ENST00000542838 KCNC4Q03721 635 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 PIGFQ07326 219 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 ZNF235Q14590 738 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 SPCS2Q15005 226 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 CYP2A13Q16696 494 aa12.78□□□□□ -0.36
DDX11-223ENST00000542838 RAP1GAP2Q684P5 730 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms