RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IL12AP29459 219 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 TRIM16LQ309B1 348 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 SMYD5Q6GMV2 418 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 C17orf99Q6UX52 265 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ATP6V0D2Q8N8Y2 350 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 OR2T11Q8NH01 316 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ITFG1Q8TB96 612 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 PTCD2Q8WV60 388 aaKnown RBP15.17■□□□□ 0.02
CNOT9-208ENST00000542068 MYEOVQ96EZ4 313 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 TRIM62Q9BVG3 475 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 CD274Q9NZQ7 290 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 ABCD2Q9UBJ2 740 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 DAPK2Q9UIK4 370 aa15.17■□□□□ 0.02
CNOT9-208ENST00000542068 MYLKQ15746 1914 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 IQCF5A8MTL0 148 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 HRH2P25021 359 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 MTHFRP42898 656 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 FPGSQ05932 587 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SPOUT1Q5T280 376 aaKnown RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 PRSS55Q6UWB4 352 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 MILR1Q7Z6M3 343 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 PHYKPLQ8IUZ5 450 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 DENND1CQ8IV53 801 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 PACRGLQ8N7B6 248 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LPCAT1Q8NF37 534 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 L3HYPDHQ96EM0 354 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 IMP4Q96G21 291 aaKnown RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 DUS3LQ96G46 650 aaKnown RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 BDH2Q9BUT1 245 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 THUMPD3Q9BV44 507 aaKnown RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 TUBA8Q9NY65 449 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LRFN2Q9ULH4 789 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 CBFA2T3O75081 653 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 GPIP06744 558 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SEMG2Q02383 582 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 FOXD4Q12950 439 aaPredicted RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 ATP6AP1LQ52LC2 224 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 ZRANB3Q5FWF4 1079 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SPESP1Q6UW49 350 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 CCDC81Q6ZN84 652 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SPRED1Q7Z699 444 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 RASAL3Q86YV0 1011 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 PGBD5Q8N414 524 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SFRP1Q8N474 314 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 OR52B6Q8NGF0 335 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 NCLNQ969V3 563 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 SUSD3Q96L08 255 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 CSF3RQ99062 836 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 GPR62Q9BZJ7 368 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LIMD1Q9UGP4 676 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 GPR45Q9Y5Y3 372 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LRRC37A2A6NM11 1700 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 TMEM247A6NEH6 219 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LDB2O43679 373 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 E2F6O75461 281 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 NDUFS3O75489 264 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 DCKP27707 260 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LCP2Q13094 533 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 DGCR6Q14129 220 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 MRNIPQ6NTE8 343 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 RGMBQ6NW40 437 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 DHRS4L2Q6PKH6 230 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 TBC1D21Q8IYX1 336 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 MFSD1Q9H3U5 465 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 TOR3AQ9H497 397 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 CATSPERZQ9NTU4 200 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 PTBP2Q9UKA9 531 aaKnown RBP15.16■□□□□ 0.02
CNOT9-208ENST00000542068 BLOC1S6Q9UL45 172 aa15.16■□□□□ 0.02
CNOT9-208ENST00000542068 LOC285556D6RIA3 1793 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 SLC7A4O43246 635 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 OR1I1O60431 355 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 GMNNO75496 209 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CHEK2O96017 543 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CYP4B1P13584 511 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CDH3P22223 829 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 FSHRP23945 695 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CYP2C18P33260 490 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 HTR6P50406 440 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 BCAP31P51572 246 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 FCGRTP55899 365 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 SPCS2Q15005 226 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 PTPRNQ16849 979 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 RGS21Q2M5E4 152 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 KANK2Q63ZY3 851 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 ENPP6Q6UWR7 440 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 SAPCD2Q86UD0 394 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CLHC1Q8NHS4 586 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 INVSQ9Y283 1065 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 KANSL1LA0AUZ9 987 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 NIPSNAP2O75323 286 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 MMP2P08253 660 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 FCGR1AP12314 374 aa15.15■□□□□ 0.02
CNOT9-208ENST00000542068 CD97P48960 835 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms