RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-206	ENST00000541836	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	NAALAD2	Q9Y3Q0	740 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TSC2	P49815	1807 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PIR	O00625	290 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	VPS4B	O75351	444 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	WISP3	O95389	354 aa	Predicted RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CHEK2	O96017	543 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	MAG	P20916	626 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	IL12A	P29459	219 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	IL5RA	Q01344	420 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	YWHAH	Q04917	246 aa	Predicted RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	LCP2	Q13094	533 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FXN	Q16595	210 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ENPP6	Q6UWR7	440 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PRR23B	Q6ZRT6	265 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RIOX2	Q8IUF8	465 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	POC5	Q8NA72	575 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FRS2	Q8WU20	508 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PHF10	Q8WUB8	498 aa	Known RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF486	Q96H40	463 aa	Predicted RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	DSN1	Q9H410	356 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PARVB	Q9HBI1	364 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ERVK-18	Q9QC07	812 aa		13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	INTS6	Q9UL03	887 aa	Known RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	UBQLN1	Q9UMX0	589 aa	Known RBP	13.55	□□□□□ -0.24
NPIPA1-206	ENST00000541836	MIA3	Q5JRA6	1907 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ANKRD34B	A5PLL1	514 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	MAFK	O60675	156 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RFPL2	O75678	378 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	S1PR4	O95977	384 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	GSN	P06396	782 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	BMPR1A	P36894	532 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TGFBR1	P36897	503 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ARSD	P51689	593 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	LINC01465	Q8N7H1	131 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PJA1	Q8NG27	643 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RHOXF1	Q8NHV9	184 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF560	Q96MR9	790 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ACOX2	Q99424	681 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RBM4B	Q9BQ04	359 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RBM4	Q9BWF3	364 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	DNAJB9	Q9UBS3	223 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	AASS	Q9UDR5	926 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	INVS	Q9Y283	1065 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TBX1	O43435	398 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SNX2	O60749	519 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RPS12	P25398	132 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PRDX3	P30048	256 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SLC26A3	P40879	764 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	EIF2D	P41214	584 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TAF6	P49848	677 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	NEK2	P51955	445 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CDC20	Q12834	499 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	NKG7	Q16617	165 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	LYSMD2	Q8IV50	215 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ARHGAP12	Q8IWW6	846 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	RPL3L	Q92901	407 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ISG20	Q96AZ6	181 aa	Known RBP	13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	BTBD2	Q9BX70	525 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SPATC1L	Q9H0A9	340 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	MIR1-1HG	Q9H1L0	117 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SP140L	Q9H930	580 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	LIMD1	Q9UGP4	676 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	C3orf18	Q9UK00	162 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836		U3KQV3	271 aa		13.54	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PLXNA1	Q9UIW2	1896 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ILVBL	A1L0T0	632 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SUPT3H	B4E1H0	165 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	MATN3	O15232	486 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	UPK1B	O75841	260 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ANGPTL1	O95841	491 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	HOXA11	P31270	313 aa	Predicted RBP	13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FMO3	P31513	532 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CXCR3	P49682	368 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	COPZ1	P61923	177 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF33A	Q06730	810 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF691	Q5VV52	312 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PLD3	Q8IV08	490 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	NUDT8	Q8WV74	236 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF300	Q96RE9	604 aa	Predicted RBP	13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	BCL7B	Q9BQE9	202 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SLC39A8	Q9C0K1	460 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SLIRP	Q9GZT3	109 aa	Known RBP	13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF112	Q9UJU3	913 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TESMIN	Q9Y4I5	508 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FAM234B	A2RU67	622 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	TNPO2	O14787	897 aa	Known RBP	13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	KCNK2	O95069	426 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	FTH1	P02794	183 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	NTRK1	P04629	796 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CCDC159	P0C7I6	412 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PRR35	P0CG20	571 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	ZNF286B	P0CG31	522 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	GGT1	P19440	569 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	GRK3	P35626	688 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	SERPINH1	P50454	418 aa	Known RBP	13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CCNA1	P78396	465 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	PRKG2	Q13237	762 aa		13.53	□□□□□ -0.24
NPIPA1-206	ENST00000541836	CDK5R2	Q13319	367 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms