RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 WDR12Q9GZL7 423 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 GPN2Q9H9Y4 310 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 HMG20AQ9NP66 347 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ACOT9Q9Y305 439 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FRMPD3Q5JV73 1810 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TREHO43280 583 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 NDUFS2O75306 463 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 JRKO75564 520 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OR4Q2P0C623 313 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SLC35E2BP0CK96 405 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 HNRNPLP14866 589 aaKnown RBP eCLIP5.19□□□□□ -1.586e-6■□□□□ 11.3
PROM1-220ENST00000540805 JUNBP17275 347 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 DNAJB1P25685 340 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 LHX1P48742 406 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CCT8P50990 548 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ATP6V0D1P61421 351 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 POU6F1Q14863 301 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 DDR2Q16832 855 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PXDC1Q5TGL8 231 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPRYD7Q5W111 196 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SIGIRRQ6IA17 410 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 C8orf82Q6P1X6 216 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 TMC5Q6UXY8 1006 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FAM124AQ86V42 546 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ZC3HC1Q86WB0 502 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 SPPL2CQ8IUH8 684 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CMTR2Q8IYT2 770 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CENPLQ8N0S6 344 aaPredicted RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 DEFB106AQ8N104 65 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PYROXD2Q8N2H3 581 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 SFRP1Q8N474 314 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ATAD1Q8NBU5 361 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OR7G1Q8NGA0 311 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 FIG4Q92562 907 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 KHSRPQ92945 711 aaKnown RBP eCLIP5.19□□□□□ -1.58
PROM1-220ENST00000540805 CGREF1Q99674 301 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 OMDQ99983 421 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ALOXE3Q9BYJ1 711 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ULBP1Q9BZM6 244 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 TRIM8Q9BZR9 551 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 PRDM12Q9H4Q4 367 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 MEAF6Q9HAF1 191 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 IL1RL2Q9HB29 575 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CYP4F12Q9HCS2 524 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 CNGB3Q9NQW8 809 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ERVK-11Q9UQG0 969 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 RAD54BQ9Y620 910 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 USP3Q9Y6I4 520 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 V9GYQ6 96 aa5.19□□□□□ -1.58
PROM1-220ENST00000540805 ZNF638Q14966 1978 aaKnown RBP5.19□□□□□ -1.58
PROM1-220ENST00000540805 BBIP1A8MTZ0 92 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SUPT3HB4E1H0 165 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TARM1B6A8C7 271 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TAF4O00268 1085 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 XYLBO75191 536 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SEC14L2O76054 403 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ALBP02768 609 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ABCB1P08183 1280 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 SLC2A3P11169 496 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 PRKCAP17252 672 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ATP5F1P24539 256 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 HOXA11P31270 313 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 CYP2C18P33260 490 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TGFBR1P36897 503 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 HPCAL1P37235 193 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RPS9P46781 194 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 ARHGDIAP52565 204 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 IST1P53990 364 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RAD23AP54725 363 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TBX4P57082 545 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 COPZ1P61923 177 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 INCA1Q0VD86 236 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 KCNA10Q16322 511 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CERCAMQ5T4B2 595 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 PPP1R26Q5T8A7 1209 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 LCN8Q6JVE9 175 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ERAP2Q6P179 960 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SLC26A9Q7LBE3 791 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 OOSP2Q86WS3 158 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ZDHHC17Q8IUH5 632 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 C12orf29Q8N999 325 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ABHD11Q8NFV4 315 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 OR9I1Q8NGQ6 314 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SUN5Q8TC36 379 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 CSGALNACT1Q8TDX6 532 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 HDAC10Q969S8 669 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 NXNL1Q96CM4 212 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 SPACA7Q96KW9 195 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 DMRTB1Q96MA1 342 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 ZNF641Q96N77 438 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 EMILIN2Q9BXX0 1053 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 B3GNT5Q9BYG0 378 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 EML4Q9HC35 981 aaKnown RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 MARCH2Q9P0N8 246 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 RCOR3Q9P2K3 495 aaPredicted RBP5.18□□□□□ -1.58
PROM1-220ENST00000540805 EGFL7Q9UHF1 273 aa5.18□□□□□ -1.58
PROM1-220ENST00000540805 GTF2IRD1Q9UHL9 959 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms