RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LAMTOR5O43504 91 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TSC22D2O75157 780 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PRKD3O94806 890 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SNAP29O95721 258 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SLC4A1P02730 911 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PLA2G16P53816 162 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GBE1Q04446 702 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 MBTD1Q05BQ5 628 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 DLG2Q15700 870 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 NFE2Q16621 373 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 CCDC58Q4VC31 144 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SDE2Q6IQ49 451 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 R3HCC1LQ7Z5L2 792 aaKnown RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 RAB44Q7Z6P3 723 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 CAND1Q86VP6 1230 aaKnown RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 FAM131BQ86XD5 332 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 AQP12AQ8IXF9 295 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 UBALD2Q8IYN6 164 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TMEM174Q8WUU8 243 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 MUS81Q96NY9 551 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 HAPLN2Q9GZV7 340 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 MINDY3Q9H8M7 445 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CCDC177Q9NQR7 707 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 ITM2CQ9NQX7 267 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ZNF236Q9UL36 1845 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATP6AP2A0A1C7CYW4 349 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TK2O00142 265 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ACOT8O14734 319 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATP6AP2O75787 350 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 METTL18O95568 372 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GPIP06744 558 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 THRBP10828 461 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 BMP1P13497 986 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ARL2P36404 184 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 PNPLA4P41247 253 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ARHGDIAP52565 204 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 RBP5P82980 135 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ENPEPQ07075 957 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TDGQ13569 410 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CEP78Q5JTW2 689 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 IL31Q6EBC2 164 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 MFSD2AQ8NA29 543 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ST13P5Q8NFI4 369 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 NCLNQ969V3 563 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.61□□□□□ -1.031e-8■■■■■ 55.9
DDB1-217ENST00000540166 ACO2Q99798 780 aaKnown RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 EPHX3Q9H6B9 360 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GPN2Q9H9Y4 310 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 ADPRHL2Q9NX46 363 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 KLQ9UEF7 1012 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TPRKBQ9Y3C4 175 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 RAD54BQ9Y620 910 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ISPDA4D126 451 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 M0R296 226 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 TFECO14948 347 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 NOS1APO75052 506 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 WDR47O94967 919 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 IL18RAPO95256 599 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 HNRNPLP14866 589 aaKnown RBP eCLIP8.61□□□□□ -1.036e-6■■■□□ 18.9
DDB1-217ENST00000540166 PROZP22891 400 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 GRIK1P39086 918 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 KCNK10P57789 538 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATP6V0D1P61421 351 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 EPS8Q12929 822 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 UGP2Q16851 508 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ARMCX4Q5H9R4 360 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SNAP47Q5SQN1 464 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 BPHLQ86WA6 291 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 SMG8Q8ND04 991 aaKnown RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 TET1Q8NFU7 2136 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 OR13F1Q8NGS4 319 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 UBASH3BQ8TF42 649 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 FAR1Q8WVX9 515 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 HTR3CQ8WXA8 447 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATL1Q8WXF7 558 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 OMDQ99983 421 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 APOL4Q9BPW4 351 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CDT1Q9H211 546 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ATP13A3Q9H7F0 1226 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 SPATA6Q9NWH7 488 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 USE1Q9NZ43 259 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 CRNNQ9UBG3 495 aaPredicted RBP8.61□□□□□ -1.03
DDB1-217ENST00000540166 ZDHHC2Q9UIJ5 367 aa8.61□□□□□ -1.03
DDB1-217ENST00000540166 ZNF99A8MXY4 864 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 LACTBL1A8MY62 500 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 ZW10O43264 779 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 B4GAT1O43505 415 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms