RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 OR4L1Q8NH43 312 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 NACC2Q96BF6 587 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 ZHX1-C8orf76Q96EF9 292 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 FCRL3Q96P31 734 aaPredicted RBP9.9□□□□□ -0.83
TRAF1-202ENST00000540010 TSSK3Q96PN8 268 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 FCRL5Q96RD9 977 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 CIPCQ9C0C6 399 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 TRIM45Q9H8W5 580 aaPredicted RBP9.9□□□□□ -0.83
TRAF1-202ENST00000540010 MIEF1Q9NQG6 463 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.83
TRAF1-202ENST00000540010 IDO1P14902 403 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 CTPS1P17812 591 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 JAK1P23458 1154 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 CCR10P46092 362 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 YAP1P46937 504 aaKnown RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 RETSATQ6NUM9 610 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 CNSTQ6PJW8 725 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 OR2T12Q8NG77 320 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 OR9I1Q8NGQ6 314 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 MZB1Q8WU39 189 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 BCL7CQ8WUZ0 217 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 IGSF8Q969P0 613 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 LINGO1Q96FE5 620 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 FAM126AQ9BYI3 521 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 ADGRE2Q9UHX3 823 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 TAF4O00268 1085 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 RFPL1O75677 317 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 FTH1P02794 183 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 ANXA6P08133 673 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 IMPDH2P12268 514 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 ALDH4A1P30038 563 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 IRF8Q02556 426 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 LIPEQ05469 1076 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PLEKHM3Q6ZWE6 761 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 NAT16Q8N8M0 369 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 OR4K2Q8NGD2 314 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 TWIST2Q8WVJ9 160 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 REXO5Q96IC2 774 aaKnown RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 OR52E6Q96RD3 313 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 CCDC28BQ9BUN5 200 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PREBQ9HCU5 417 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PRR23D1E9PI22 279 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 MLYCDO95822 493 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 CLTBP09497 229 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PRR23D2P0DMB1 279 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 HOXB8P17481 243 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 POLD2P49005 469 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 DSC2Q02487 901 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 SLC10A7Q0GE19 358 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 HNRNPDQ14103 355 aaKnown RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 INAQ16352 499 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 REP15Q6BDI9 236 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 OGFOD2Q6N063 350 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 GALNT18Q6P9A2 607 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 DET1Q7L5Y6 550 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF605Q86T29 641 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 HIPK1Q86Z02 1210 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 HTRA1Q92743 480 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 PHF21AQ96BD5 680 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 SLC39A13Q96H72 371 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 HOPXQ9BPY8 73 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 ADI1Q9BV57 179 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 MTRRQ9UBK8 725 aa9.89□□□□□ -0.83
TRAF1-202ENST00000540010 SAMHD1Q9Y3Z3 626 aaKnown RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 POLR3HQ9Y535 204 aaPredicted RBP9.89□□□□□ -0.83
TRAF1-202ENST00000540010 EFCAB10A6NFE3 127 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SPATA31D3P0C874 917 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ACRP10323 421 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 COX7A2P14406 83 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 EPHB3P54753 998 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 NCF4Q15080 339 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CRTC3Q6UUV7 619 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ATG14Q6ZNE5 492 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SPATA31D4Q6ZUB0 917 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TBC1D21Q8IYX1 336 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF614Q8N883 585 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PKP2Q99959 881 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TRMOQ9BU70 441 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SPG21Q9NZD8 308 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TTC24A2A3L6 582 aaPredicted RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TRIM43BA6NCK2 446 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 UBXN8O00124 270 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 CBFA2T3O75081 653 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SIX3O95343 332 aaPredicted RBP9.88□□□□□ -0.83
TRAF1-202ENST00000540010 H6PDO95479 791 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MADCAM1Q13477 382 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SLCO6A1Q86UG4 719 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 MCOLN3Q8TDD5 553 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 BTN2A2Q8WVV5 523 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 HPS1Q92902 700 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 BORCS5Q969J3 196 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 IL12RB2Q99665 862 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 SLC25A51Q9H1U9 297 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 TPK1Q9H3S4 243 aa9.88□□□□□ -0.83
TRAF1-202ENST00000540010 GKN1Q9NS71 199 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms