RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MAPK12P53778 367 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 HNRNPDQ14103 355 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 XKR4Q5GH76 650 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SAMD14Q8IZD0 417 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 IQCKQ8N0W5 287 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SLC34A3Q8N130 599 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CPT1BQ92523 772 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SPOCK2Q92563 424 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 NARS2Q96I59 477 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF347Q96SE7 839 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TMEM109Q9BVC6 243 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SQORQ9Y6N5 450 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 UBR2Q8IWV8 1755 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TAF4O00268 1085 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FABP3P05413 133 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 STARP49675 285 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RAB2AP61019 212 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RIPK1Q13546 671 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 HKDC1Q2TB90 917 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DCST1Q5T197 706 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CEP68Q76N32 757 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF567Q8N184 647 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FUBP3Q96I24 572 aaKnown RBP eCLIP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GOLGA2P5Q9HBQ8 144 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TLR6Q9Y2C9 796 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MRPS17Q9Y2R5 130 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 REXO2Q9Y3B8 237 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RIPK3Q9Y572 518 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SCAMP3O14828 347 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FAM163BP0C2L3 166 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PTPN5P54829 565 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DAOAP59103 153 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RPP38P78345 283 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CAP1Q01518 475 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GAD2Q05329 585 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MYBPC3Q14896 1274 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 HGSNATQ68CP4 663 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 AHI1Q8N157 1196 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SVOPLQ8N434 492 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DQX1Q8TE96 717 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 OMA1Q96E52 524 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GPR21Q99679 349 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FAM83DQ9H4H8 585 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GPN1Q9HCN4 374 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TIMMDC1Q9NPL8 285 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ABCB10Q9NRK6 738 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF222Q9UK12 451 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RGPD5Q99666 1765 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PSMD11O00231 422 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 KERAO60938 352 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 LGR5O75473 907 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RNASEH2AO75792 299 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PRAMEF1O95521 474 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GOT2P00505 430 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SERPINA1P01009 418 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 UGT2B4P06133 528 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 LAMP2P13473 410 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 VARSP26640 1264 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 VBP1P61758 197 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 NAE1Q13564 534 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DENND5AQ6IQ26 1287 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MPP5Q8N3R9 675 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SLC43A3Q8NBI5 491 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SMG7Q92540 1137 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 HEPHQ9BQS7 1158 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ABCG4Q9H172 646 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 NMUR1Q9HB89 426 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF282Q9UDV7 671 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MRPS7Q9Y2R9 242 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ASB3Q9Y575 518 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 BCKDKO14874 412 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CASKO14936 926 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TIPRLO75663 272 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 STBD1O95210 358 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CCNE2O96020 404 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SPATA31D3P0C874 917 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ALPPL2P10696 532 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CTSKP43235 329 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GBE1Q04446 702 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 LACTB2Q53H82 288 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DDI2Q5TDH0 399 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FOXR1Q6PIV2 292 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SPATA31D4Q6ZUB0 917 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 BTN2A1Q7KYR7 527 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 NATD1Q8N6N6 113 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 C11orf65Q8NCR3 313 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TTLQ8NG68 377 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 OR14C36Q8NHC7 312 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 NDRG1Q92597 394 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MCRS1Q96EZ8 462 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CRELD1Q96HD1 420 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CLCC1Q96S66 551 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GPR88Q9GZN0 384 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SMURF2Q9HAU4 748 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 XRN1Q8IZH2 1706 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 C2CD4BA6NLJ0 364 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TNFRSF11BO00300 401 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PI15O43692 258 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 AHCYL1O43865 530 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ESR1P03372 595 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms