RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NFATC4Q14934 902 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 GPR33Q49SQ1 333 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 FASTKD1Q53R41 847 aaKnown RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 ZNF648Q5T619 568 aaPredicted RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 GPRC6AQ5T6X5 926 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 IQCHQ86VS3 1027 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 PHYKPLQ8IUZ5 450 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 LMNTD2Q8IXW0 634 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 NXPE1Q8N323 547 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 MFSD2AQ8NA29 543 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 SUMF1Q8NBK3 374 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 DDHD1Q8NEL9 900 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 FAM174AQ8TBP5 190 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 ULK4Q96C45 1275 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 CCDC97Q96F63 343 aaPredicted RBP17.02■□□□□ 0.32
CLN6-202ENST00000538696 KLHDC7BQ96G42 594 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 HIC2Q96JB3 615 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 CAB39LQ9H9S4 337 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 MKS1Q9NXB0 559 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 SUSD2Q9UGT4 822 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
CLN6-202ENST00000538696 CACNB4O00305 520 aaPredicted RBP17.01■□□□□ 0.31
CLN6-202ENST00000538696 COPEO14579 308 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 MTX2O75431 263 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 S1PR4O95977 384 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 TOP3BO95985 862 aaKnown RBP17.01■□□□□ 0.31
CLN6-202ENST00000538696 HOXC4P09017 264 aaPredicted RBP17.01■□□□□ 0.31
CLN6-202ENST00000538696 GNSP15586 552 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 ACRV1P26436 265 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 NBL1P41271 181 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 DPP6P42658 865 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 YPEL5P62699 121 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
CLN6-202ENST00000538696 DBN1Q16643 649 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
CLN6-202ENST00000538696 LAIR1Q6GTX8 287 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 CDHR3Q6ZTQ4 885 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 TAS2R42Q7RTR8 314 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 GALNT7Q86SF2 657 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 SERPINA9Q86WD7 417 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 GDAP1Q8TB36 358 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 TCP10LQ8TDR4 215 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 ACMSDQ8TDX5 336 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 PSD3Q9NYI0 1048 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 SLC17A7Q9P2U7 560 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 SLC39A10Q9ULF5 831 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
CLN6-202ENST00000538696 PRR5-ARHGAP8B1AHC4 643 aa17■□□□□ 0.31
CLN6-202ENST00000538696 VILLO15195 856 aa17■□□□□ 0.31
CLN6-202ENST00000538696 ZWINTO95229 277 aa17■□□□□ 0.31
CLN6-202ENST00000538696 SLC25A14O95258 325 aaPredicted RBP17■□□□□ 0.31
CLN6-202ENST00000538696 TYK2P29597 1187 aa17■□□□□ 0.31
CLN6-202ENST00000538696 LSP1P33241 339 aa17■□□□□ 0.31
CLN6-202ENST00000538696 HOXD12P35452 270 aa17■□□□□ 0.31
CLN6-202ENST00000538696 CSNK1EP49674 416 aaKnown RBP17■□□□□ 0.31
CLN6-202ENST00000538696 AFF3P51826 1226 aaKnown RBP17■□□□□ 0.31
CLN6-202ENST00000538696 PGGT1BP53609 377 aa17■□□□□ 0.31
CLN6-202ENST00000538696 B4GALNT1Q00973 533 aa17■□□□□ 0.31
CLN6-202ENST00000538696 TYSND1Q2T9J0 566 aa17■□□□□ 0.31
CLN6-202ENST00000538696 PPM1JQ5JR12 505 aa17■□□□□ 0.31
CLN6-202ENST00000538696 MRNIPQ6NTE8 343 aa17■□□□□ 0.31
CLN6-202ENST00000538696 DOK6Q6PKX4 331 aa17■□□□□ 0.31
CLN6-202ENST00000538696 ADGRG6Q86SQ4 1221 aa17■□□□□ 0.31
CLN6-202ENST00000538696 CNPY4Q8N129 248 aa17■□□□□ 0.31
CLN6-202ENST00000538696 GPATCH11Q8N954 259 aa17■□□□□ 0.31
CLN6-202ENST00000538696 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
CLN6-202ENST00000538696 ELMO2Q96JJ3 720 aa17■□□□□ 0.31
CLN6-202ENST00000538696 NDNQ99608 321 aa17■□□□□ 0.31
CLN6-202ENST00000538696 SLC13A1Q9BZW2 595 aa17■□□□□ 0.31
CLN6-202ENST00000538696 VPS11Q9H270 941 aa17■□□□□ 0.31
CLN6-202ENST00000538696 ZDHHC3Q9NYG2 299 aa17■□□□□ 0.31
CLN6-202ENST00000538696 HCN4Q9Y3Q4 1203 aa17■□□□□ 0.31
CLN6-202ENST00000538696 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
CLN6-202ENST00000538696 ZFC3H1O60293 1989 aaKnown RBP17■□□□□ 0.31
CLN6-202ENST00000538696 TDRD6O60522 2096 aaKnown RBP17■□□□□ 0.31
CLN6-202ENST00000538696 BPTFQ12830 3046 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 A0A1B0GVT2 93 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 TLR4O00206 839 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 PHGDHO43175 533 aaKnown RBP16.99■□□□□ 0.31
CLN6-202ENST00000538696 ASMTLO95671 621 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 SAT1P21673 171 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 MPLP40238 635 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 CSRP3P50461 194 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 THOP1P52888 689 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 NXPH1P58417 271 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 BNC1Q01954 994 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 OVGP1Q12889 678 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 USP10Q14694 798 aaKnown RBP16.99■□□□□ 0.31
CLN6-202ENST00000538696 TERF2Q15554 542 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 AARS2Q5JTZ9 985 aaKnown RBP16.99■□□□□ 0.31
CLN6-202ENST00000538696 LDLRAP1Q5SW96 308 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 LVRNQ6Q4G3 990 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 MACC1Q6ZN28 852 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 SPATS2Q86XZ4 545 aaKnown RBP16.99■□□□□ 0.31
CLN6-202ENST00000538696 SPNS2Q8IVW8 549 aa16.99■□□□□ 0.31
CLN6-202ENST00000538696 WDR92Q96MX6 357 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms