RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 STK40Q8N2I9 435 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 FNDC5Q8NAU1 212 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 ZNF597Q96LX8 424 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 UHRF1Q96T88 793 aaPredicted RBP24.6■■□□□ 1.53
RAB40C-204ENST00000538492 SLAMF8Q9P0V8 285 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 DHRS7Q9Y394 339 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 TANC1Q9C0D5 1861 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 PLXNA4Q9HCM2 1894 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 A8MX80 341 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 SLC22A3O75751 556 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 PGLSO95336 258 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 PTRHD1Q6GMV3 140 aaKnown RBP24.6■■□□□ 1.53
RAB40C-204ENST00000538492 SERPINA9Q86WD7 417 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 CLDN19Q8N6F1 224 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 PIH1D2Q8WWB5 315 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.6■■□□□ 1.532e-6■■■■■ 54.9
RAB40C-204ENST00000538492 ALG14Q96F25 216 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 MAGEE1Q9HCI5 957 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 CPQQ9Y646 472 aa24.6■■□□□ 1.53
RAB40C-204ENST00000538492 TPST1O60507 370 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 CXCL10P02778 98 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 TFAP2AP05549 437 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 HSD17B1P14061 328 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 PSMC3P17980 439 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 UGT1A6P19224 532 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 TIGD2Q4W5G0 525 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 TBCELQ5QJ74 424 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 C6orf136Q5SQH8 315 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 EFL1Q7Z2Z2 1120 aaKnown RBP24.59■■□□□ 1.53
RAB40C-204ENST00000538492 AHI1Q8N157 1196 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 TRIM4Q9C037 500 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 PCDHA9Q9Y5H5 950 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 CCDC154A6NI56 674 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 SYNCRIPO60506 623 aaKnown RBP24.59■■□□□ 1.53
RAB40C-204ENST00000538492 GREM1O60565 184 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 GUCA1CO95843 209 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 ERVK-8P63133 956 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 DIS3LQ8TF46 1054 aaKnown RBP24.59■■□□□ 1.53
RAB40C-204ENST00000538492 ZUFSPQ96AP4 578 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 TMEM169Q96HH4 297 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 RPL10LQ96L21 214 aaKnown RBP24.59■■□□□ 1.53
RAB40C-204ENST00000538492 ZNF382Q96SR6 550 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 CLPBQ9H078 707 aa24.59■■□□□ 1.53
RAB40C-204ENST00000538492 C1orf232A0A0U1RR37 186 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 DHRS12A0PJE2 317 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 FAM149AA5PLN7 773 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 KATNA1O75449 491 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 CAPN1P07384 714 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 HTR6P50406 440 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 NAA20P61599 178 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 SBSNQ6UWP8 590 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 Q6ZSR9 355 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 METTL6Q8TCB7 284 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 DDI1Q8WTU0 396 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 TMEM125Q96AQ2 219 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 SLC2A11Q9BYW1 496 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 CCM2LQ9NUG4 571 aaPredicted RBP24.58■■□□□ 1.53
RAB40C-204ENST00000538492 ARMC1Q9NVT9 282 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 NUDT4Q9NZJ9 180 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 HSFX1Q9UBD0 423 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 MTHFD1P11586 935 aaKnown RBP24.58■■□□□ 1.53
RAB40C-204ENST00000538492 NELFEP18615 380 aaKnown RBP24.58■■□□□ 1.53
RAB40C-204ENST00000538492 IL12AP29459 219 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 POLR2JP52435 117 aaKnown RBP24.58■■□□□ 1.53
RAB40C-204ENST00000538492 ATP6AP1LQ52LC2 224 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 ZBTB49Q6ZSB9 765 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 LKAAEAR1Q8TD35 194 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 TMEM74Q96NL1 305 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 BRINP2Q9C0B6 783 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 ASB8Q9H765 288 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 ZFYVE1Q9HBF4 777 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 RIC8BQ9NVN3 520 aa24.58■■□□□ 1.53
RAB40C-204ENST00000538492 A0A1B0GTW7 788 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 SAC3D1A6NKF1 404 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 SOCS2O14508 198 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 GAPDHSO14556 408 aaPredicted RBP24.57■■□□□ 1.52
RAB40C-204ENST00000538492 ARPC2O15144 300 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 CNPP09543 421 aaKnown RBP24.57■■□□□ 1.52
RAB40C-204ENST00000538492 OXTRP30559 389 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 COQ5Q5HYK3 327 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 IL27RAQ6UWB1 636 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 GOLGA7Q7Z5G4 137 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 CHERPQ8IWX8 916 aaKnown RBP24.57■■□□□ 1.52
RAB40C-204ENST00000538492 DCAF4L2Q8NA75 395 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 DEFB118Q96PH6 123 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 GRIP2Q9C0E4 1043 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 PRSS21Q9Y6M0 314 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 CLDN7O95471 211 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 UGT1A1P22309 533 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 UGT1A4P22310 534 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 UGT1A3P35503 534 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 UGT1A5P35504 534 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 PRKCQQ04759 706 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 ERMP1Q7Z2K6 904 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 METTL25Q8N6Q8 603 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 C17orf80Q9BSJ5 609 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 TRIM54Q9BYV2 358 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 TRIM15Q9C019 465 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 ALG2Q9H553 416 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 NSUN3Q9H649 340 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms