RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 ASB8Q9H765 288 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 AIG1Q9NVV5 245 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 PRSS21Q9Y6M0 314 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 PLXNB3Q9ULL4 1909 aa13.85□□□□□ -0.19
LIMK1-208ENST00000538333 LAMA2P24043 3122 aaKnown RBP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 C9JVG2 144 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 FGF18O76093 207 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 OR4F21O95013 312 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 CYBBP04839 570 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 LINC00271P0C7V0 271 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 ACRV1P26436 265 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 ERVPABLB-1P60509 514 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 GRIK2Q13002 908 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 RBBP7Q16576 425 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 COQ5Q5HYK3 327 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 PTRHD1Q6GMV3 140 aaKnown RBP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 METTL3Q86U44 580 aaKnown RBP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 RBFAQ8N0V3 343 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 MINDY1Q8N5J2 469 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 RIN3Q8TB24 985 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 TSPEARQ8WU66 669 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 GCNAQ96QF7 691 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 LYSMD1Q96S90 227 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 ACOX2Q99424 681 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 HOPXQ9BPY8 73 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 ATP13A3Q9H7F0 1226 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 GMPR2Q9P2T1 348 aaKnown RBP13.84□□□□□ -0.19
LIMK1-208ENST00000538333 APPL1Q9UKG1 709 aa13.84□□□□□ -0.19
LIMK1-208ENST00000538333 A0A1W2PRU2 124 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 GOLGA8CPA6NN73 597 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 NME4O00746 187 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 DNAJA2O60884 412 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 IGSF6O95976 241 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 GJA1P17302 382 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 ITGALP20701 1170 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 PAX7P23759 505 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 FOLH1Q04609 750 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 RCAN2Q14206 197 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 CBARPQ8N350 705 aaPredicted RBP13.83□□□□□ -0.19
LIMK1-208ENST00000538333 PDPRQ8NCN5 879 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 CATSPER1Q8NEC5 780 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 OR2AP1Q8NGE2 309 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 SLCO4A1Q96BD0 722 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 SLC45A3Q96JT2 553 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 TEX37Q96LM6 180 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 YME1L1Q96TA2 773 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 C17orf80Q9BSJ5 609 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.19
LIMK1-208ENST00000538333 PDP2Q9P2J9 529 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.19
LIMK1-208ENST00000538333 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CXorf51AA0A1B0GTR3 108 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 LEFTY2O00292 366 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 ANGPT2O15123 496 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 MAP3K13O43283 966 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CHEK2O96017 543 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 LRG1P02750 347 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 SRCP12931 536 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CTSOP43234 321 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-208ENST00000538333 YBX1P67809 324 aaKnown RBP13.83□□□□□ -0.2
LIMK1-208ENST00000538333 C18orf21Q32NC0 220 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-208ENST00000538333 PITRM1Q5JRX3 1037 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 SCIMPQ6UWF3 145 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 Q6ZSR9 355 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 TSPAN33Q86UF1 283 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 SLC15A3Q8IY34 581 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CLDN19Q8N6F1 224 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CDYL2Q8N8U2 506 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 DCBLD1Q8N8Z6 715 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CDK15Q96Q40 435 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 CCT7Q99832 543 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 SLC46A2Q9BY10 475 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 AP4S1Q9Y587 144 aa13.83□□□□□ -0.2
LIMK1-208ENST00000538333 GLYATL1P3A0A0U1RQE8 302 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 ASPDHA6ND91 283 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 AGAP14A8MT82 685 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 OR7A17O14581 309 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 GIPC1O14908 333 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 FFAR2O15552 330 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 DENRO43583 198 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 C8AP07357 584 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UGT1A6P19224 532 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UGT1A1P22309 533 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UGT1A4P22310 534 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UGT1A3P35503 534 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UGT1A5P35504 534 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 STK19P49842 368 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 ERVK-8P63133 956 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 GRM2Q14416 872 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 RPS6KA2Q15349 733 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TLR1Q15399 786 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 CHRNA6Q15825 494 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 PRMT9Q6P2P2 845 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms