RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 TUBB1Q9H4B7 451 aa17.26■□□□□ 0.35
SNX17-210ENST00000537606 AKTIPQ9H8T0 292 aa17.26■□□□□ 0.35
SNX17-210ENST00000537606 WDR41Q9HAD4 459 aa17.26■□□□□ 0.35
SNX17-210ENST00000537606 PIDD1Q9HB75 910 aa17.26■□□□□ 0.35
SNX17-210ENST00000537606 EIF2B4Q9UI10 523 aaKnown RBP17.26■□□□□ 0.35
SNX17-210ENST00000537606 PCDHB1Q9Y5F3 818 aa17.26■□□□□ 0.35
SNX17-210ENST00000537606 TCN1P20061 433 aaPredicted RBP17.25■□□□□ 0.35
SNX17-210ENST00000537606 VIPR2P41587 438 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 LCP2Q13094 533 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 ART3Q13508 389 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 TCEAL5Q5H9L2 206 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 SCIMPQ6UWF3 145 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 C16orf89Q6UX73 402 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 BNC2Q6ZN30 1099 aaPredicted RBP17.25■□□□□ 0.35
SNX17-210ENST00000537606 USP45Q70EL2 814 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 PCDH20Q8N6Y1 951 aaKnown RBP17.25■□□□□ 0.35
SNX17-210ENST00000537606 CDK15Q96Q40 435 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 ZNF184Q99676 751 aaPredicted RBP17.25■□□□□ 0.35
SNX17-210ENST00000537606 COMMD10Q9Y6G5 202 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 PIKFYVEQ9Y2I7 2098 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 GUCA1CO95843 209 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 CD9P21926 228 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 ATP13A5Q4VNC0 1218 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 AGKQ53H12 422 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 GRAMD4Q6IC98 578 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 DHDDSQ86SQ9 333 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 STON2Q8WXE9 905 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 HGH1Q9BTY7 390 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 TBC1D14Q9P2M4 693 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 B4GALT6Q9UBX8 382 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 GNPTGQ9UJJ9 305 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 ZNF225Q9UK10 706 aa17.25■□□□□ 0.35
SNX17-210ENST00000537606 SLC22A2O15244 555 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 CRCPO75575 148 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 FGF4P08620 206 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 RPS17P08708 135 aaKnown RBP17.24■□□□□ 0.35
SNX17-210ENST00000537606 ALDOCP09972 364 aaKnown RBP17.24■□□□□ 0.35
SNX17-210ENST00000537606 POLR2EP19388 210 aaKnown RBP17.24■□□□□ 0.35
SNX17-210ENST00000537606 MS4A2Q01362 244 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 BLMHQ13867 455 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 FASTKQ14296 549 aaKnown RBP17.24■□□□□ 0.35
SNX17-210ENST00000537606 GRB7Q14451 532 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 ZRSR2Q15696 482 aaKnown RBP17.24■□□□□ 0.35
SNX17-210ENST00000537606 RBBP7Q16576 425 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 AAGABQ6PD74 315 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 NXPE1Q8N323 547 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 ZFYVE19Q96K21 471 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 EFCAB1Q9HAE3 211 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 PCTPQ9UKL6 214 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 ERVW-1Q9UQF0 538 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 CEP290O15078 2479 aa17.24■□□□□ 0.35
SNX17-210ENST00000537606 TRBV5-4A0A0C4DH59 114 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 H3BNX3 289 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 PSMD12O00232 456 aaPredicted RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 HNRNPA1P09651 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX17-210ENST00000537606 ARL1P40616 181 aaPredicted RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 UBE3AQ05086 875 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 HERC3Q15034 1050 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 ZNF423Q2M1K9 1284 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 PIGGQ5H8A4 983 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 KANK2Q63ZY3 851 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 PAOXQ6QHF9 649 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 FRA10AC1Q70Z53 315 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 SYVN1Q86TM6 617 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 RSPRY1Q96DX4 576 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 SLC45A3Q96JT2 553 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 ASB2Q96Q27 587 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 LYSMD1Q96S90 227 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 ACOX2Q99424 681 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 CPEB1Q9BZB8 566 aaKnown RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 MBD1Q9UIS9 605 aaPredicted RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 SCN8AQ9UQD0 1980 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 KLK8O60259 260 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 ADSLP30566 484 aaPredicted RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 HOXA9P31269 272 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 RECQLP46063 649 aaPredicted RBP17.23■□□□□ 0.35
SNX17-210ENST00000537606 MESP2Q0VG99 397 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 CDC16Q13042 620 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 CMPK2Q5EBM0 449 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 ARSIQ5FYB1 569 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 SBSNQ6UWP8 590 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 DET1Q7L5Y6 550 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 KBTBD6Q86V97 674 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 PGAM4Q8N0Y7 254 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 OR52B6Q8NGF0 335 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 APOL5Q9BWW9 433 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 CEP44Q9C0F1 390 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 LRCH1Q9Y2L9 728 aa17.23■□□□□ 0.35
SNX17-210ENST00000537606 C9JVG2 144 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 C5orf67F2Z3F1 127 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 STX16O14662 325 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 LEFTY1O75610 366 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 C1SP09871 688 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 PEX2P28328 305 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 DHCR24Q15392 516 aa17.22■□□□□ 0.35
SNX17-210ENST00000537606 C12orf40Q86WS4 652 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms