RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CRYZQ08257 329 aaKnown RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 TRAF2Q12933 501 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 OASLQ15646 514 aaKnown RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 KRTCAP3Q53RY4 240 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 SHQ1Q6PI26 577 aaKnown RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 IL27RAQ6UWB1 636 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 ADIPOR2Q86V24 386 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 GLCCI1Q86VQ1 547 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 TMEM173Q86WV6 379 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-208ENST00000536710 SLC38A9Q8NBW4 561 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 FAM216AQ8WUB2 273 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 TMED6Q8WW62 240 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 ERLEC1Q96DZ1 483 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 PFDN4Q9NQP4 134 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 OLAHQ9NV23 265 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 OCIAD1Q9NX40 245 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 C1RLQ9NZP8 487 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 OSGIN1Q9UJX0 560 aa5.29□□□□□ -1.56
PRKDC-208ENST00000536710 PTPRCP08575 1304 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 CREG1O75629 220 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 RFPL2O75678 378 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 KDM4BO94953 1096 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SLCO2B1O94956 709 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 CLDN14O95500 239 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 GLUD1P00367 558 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 FYNP06241 537 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 FDPSP14324 419 aaKnown RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 CORO1AP31146 461 aaKnown RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 TMPOP42166 694 aaKnown RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 GLUD2P49448 558 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 RAB28P51157 221 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 BNC1Q01954 994 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 PPARDQ03181 441 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 ARMC4Q5T2S8 1044 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 KRT39Q6A163 491 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 RHBDF2Q6PJF5 856 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 ZNF534Q76KX8 674 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 DNAJB7Q7Z6W7 309 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 THNSL1Q8IYQ7 743 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 TTC30BQ8N4P2 665 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 GCSAMQ8N6F7 178 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 OR10S1Q8NGN2 331 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 KIF18AQ8NI77 898 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 THAP6Q8TBB0 222 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 TAS1R2Q8TE23 839 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SLC38A5Q8WUX1 472 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 TANKQ92844 425 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 HDAC11Q96DB2 347 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SPACA9Q96E40 222 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 LINC00615Q96LM1 132 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 NAA11Q9BSU3 229 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 EDEM3Q9BZQ6 932 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SEMA6AQ9H2E6 1030 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 ZWILCHQ9H900 591 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 CNOT10Q9H9A5 744 aaKnown RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 GRPEL1Q9HAV7 217 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 PCDH9Q9HC56 1237 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SELENONQ9NZV5 590 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 RNF7Q9UBF6 113 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 SLC24A2Q9UI40 661 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 AMDHD2Q9Y303 409 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 TMEM184BQ9Y519 407 aaPredicted RBP5.28□□□□□ -1.56
PRKDC-208ENST00000536710 NFS1Q9Y697 457 aa5.28□□□□□ -1.56
PRKDC-208ENST00000536710 IGLV5-52A0A0A0MRZ9 124 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 MYMKA6NI61 221 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 CD8B2A6NJW9 211 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 SPRY1O43609 319 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 SSX4O60224 188 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 GNL1P36915 607 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 AMPHP49418 695 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 CTSCP53634 463 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 PLA2G7Q13093 441 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 TRAF3Q13114 568 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 MYBPHQ13203 477 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 MELKQ14680 651 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF260Q3ZCT1 412 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 FAM122CQ6P4D5 195 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 FBXL14Q8N1E6 418 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 XXYLT1Q8NBI6 393 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 ATP6V1E2Q96A05 226 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 SCMH1Q96GD3 660 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 PRMT6Q96LA8 375 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 CFAP57Q96MR6 1250 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 ZNF48Q96MX3 618 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 MS4A10Q96PG2 267 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 NEK1Q96PY6 1258 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 RAB3IPQ96QF0 476 aaPredicted RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 ADPGKQ9BRR6 497 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 FNDC11Q9BVV2 318 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 NUP85Q9BW27 656 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 FAM129AQ9BZQ8 928 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 RCC2Q9P258 522 aaKnown RBP5.27□□□□□ -1.57
PRKDC-208ENST00000536710 KCNS2Q9ULS6 477 aa5.27□□□□□ -1.57
PRKDC-208ENST00000536710 RPN1P04843 607 aaKnown RBP5.26□□□□□ -1.57
PRKDC-208ENST00000536710 SCG2P13521 617 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 CCR10P46092 362 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 TFCP2Q12800 502 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 CCDC184Q52MB2 194 aa5.26□□□□□ -1.57
PRKDC-208ENST00000536710 HECTD3Q5T447 861 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms