RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PCYT1BQ9Y5K3 369 aaPredicted RBP12.28□□□□□ -0.44
PRKDC-207ENST00000536483 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
PRKDC-207ENST00000536483 RELNP78509 3460 aa12.27□□□□□ -0.44
PRKDC-207ENST00000536483 TRBV23OR9-2A0A075B6M9 112 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 IGHV1OR21-1A0A087WYE8 117 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 AGAP14A8MT82 685 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 INPP4BO15327 924 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 KCNN4O15554 427 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 GRID2O43424 1007 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 KCNJ13O60928 360 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 SLC25A14O95258 325 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 ATP1A1P05023 1023 aaKnown RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 THRAP10827 490 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PSMA3P25788 255 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 STIP1P31948 543 aaKnown RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 CSF2RBP32927 897 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 CSTF2P33240 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 UGT1A3P35503 534 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 CHRNA4P43681 627 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PARP6Q2NL67 630 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 MEI1Q5TIA1 1274 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 DENND5AQ6IQ26 1287 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 IYDQ6PHW0 289 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 ADGRG6Q86SQ4 1221 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF761Q86XN6 746 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PTRH1Q86Y79 214 aaKnown RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PHYKPLQ8IUZ5 450 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 IPMKQ8NFU5 416 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 BRSK1Q8TDC3 778 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 SMOXQ9NWM0 555 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 OCIAD1Q9NX40 245 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 KCNK4Q9NYG8 393 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-207ENST00000536483 PTPN13Q12923 2485 aa12.27□□□□□ -0.45
PRKDC-207ENST00000536483 UBR5O95071 2799 aaPredicted RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 OR5K4A6NMS3 321 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ASMTLO95671 621 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 AGTP01019 485 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 LIFP15018 202 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF8P17098 575 aaPredicted RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 PSMB4P28070 264 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 PDE1BQ01064 536 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 TLE1Q04724 770 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 PRPSAP1Q14558 356 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 TAF1AQ15573 450 aaPredicted RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 OASLQ15646 514 aaKnown RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 TMEM71Q6P5X7 295 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 BORAQ6PGQ7 559 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 WASH2PQ6VEQ5 465 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 FAM129CQ86XR2 697 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF547Q8IVP9 402 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 AVL9Q8NBF6 648 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 DDHD1Q8NEL9 900 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 CCDC110Q8TBZ0 833 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 DPYSL5Q9BPU6 564 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 TIMM29Q9BSF4 260 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 DDA1Q9BW61 102 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 FSD1LQ9BXM9 530 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ZMYND15Q9H091 742 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 SARS2Q9NP81 518 aaKnown RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 WASH6PQ9NQA3 447 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 SLC39A1Q9NY26 324 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 PDP2Q9P2J9 529 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ZNHIT2Q9UHR6 403 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 GUCA1BQ9UMX6 200 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 R3HDM2Q9Y2K5 976 aaKnown RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
PRKDC-207ENST00000536483 DNMT3AQ9Y6K1 912 aaPredicted RBP12.26□□□□□ -0.45
PRKDC-207ENST00000536483 KIR2DS5A0A0G2JLQ3 304 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 A0A0G2JNG1 304 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 TCRBV7S2A1N4TA0A589 114 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 EFCAB7A8K855 629 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 KIR2DS3K7RE56 304 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 KMOO15229 486 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF500O60304 480 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 RAD1O60671 282 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 CCDC175P0C221 793 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 F3P13726 295 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 SLC2A4P14672 509 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 XRCC1P18887 633 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 SPAM1P38567 509 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 PPM1FP49593 454 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 POLE2P56282 527 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 CCZ1BP86790 482 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
PRKDC-207ENST00000536483 ITGA9Q13797 1035 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 KIR2DS5Q14953 304 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 P3H1Q32P28 736 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 COLEC12Q5KU26 742 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 ANKS6Q68DC2 871 aa12.25□□□□□ -0.45
PRKDC-207ENST00000536483 DRICH1Q6PGQ1 229 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms