RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NUDT22Q9BRQ3 303 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 CLPBQ9H078 707 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 FBXO44Q9H4M3 255 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 OCIAD1Q9NX40 245 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 KCNG1Q9UIX4 513 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 NAALADL1Q9UQQ1 740 aa3.96□□□□□ -1.78
YBX3-205ENST00000536107 ZNF469Q96JG9 3925 aaPredicted RBP3.96□□□□□ -1.78
YBX3-205ENST00000536107 FLNAP21333 2647 aaKnown RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 SHANK1Q9Y566 2161 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 UBA6A0AVT1 1052 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 PP2D1A8MPX8 630 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 RHPN2P1A8MT19 583 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 A8MU76 341 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 B4E171 279 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 MSI1O43347 362 aaKnown RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 CDKL5O76039 1030 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 MOCS3O95396 460 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PAK4O96013 591 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 IFNA2P01563 188 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ZDHHC11BP0C7U3 371 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PLA2G4BP0C869 781 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 GAAP10253 952 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 RALAP11233 206 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 HOXD9P28356 352 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 CSKP41240 450 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 TSPAN7P41732 249 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 BLKP51451 505 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SMSP52788 366 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 CSNK1G2P78368 415 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 IRF9Q00978 393 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PPARDQ03181 441 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ZNF174Q15697 407 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ACCSLQ4AC99 568 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SEL1L3Q68CR1 1132 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ADALQ6DHV7 355 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 GALNT17Q6IS24 598 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 C11orf87Q6NUJ2 197 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 NEK5Q6P3R8 708 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 XKRXQ6PP77 449 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 LVRNQ6Q4G3 990 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 OVCH1Q7RTY7 1134 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ACOT1Q86TX2 421 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 KCNMB4Q86W47 210 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 CPXM2Q8N436 756 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SYT2Q8N9I0 419 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 ACRBPQ8NEB7 543 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 FDCSPQ8NFU4 85 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 THAP4Q8WY91 577 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 OR8D1Q8WZ84 308 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 STAMBPL1Q96FJ0 436 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 Q96MF0 132 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 FCRL4Q96PJ5 515 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SPAG5Q96R06 1193 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ZPBPQ9BS86 351 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 RNF26Q9BY78 433 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 B3GNT5Q9BYG0 378 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SLC17A9Q9BYT1 436 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ULBP3Q9BZM4 244 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PITHD1Q9GZP4 211 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 MLXIPLQ9NP71 852 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 DMAP1Q9NPF5 467 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 DYRK4Q9NR20 520 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 COMMD8Q9NX08 183 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 GDAP2Q9NXN4 497 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 GPR83Q9NYM4 423 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 USP25Q9UHP3 1055 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 SLCO3A1Q9UIG8 710 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 AJAP1Q9UKB5 411 aaPredicted RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 CPSF3Q9UKF6 684 aaKnown RBP3.95□□□□□ -1.78
YBX3-205ENST00000536107 EDARQ9UNE0 448 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 KCNJ14Q9UNX9 436 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ERVW-1Q9UQF0 538 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 NTNG1Q9Y2I2 539 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 COQ6Q9Y2Z9 468 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PKDREJQ9NTG1 2253 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 ITIH6Q6UXX5 1313 aa3.95□□□□□ -1.78
YBX3-205ENST00000536107 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 A0A0A6YYJ9 748 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 A8MXQ7 604 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 B4DGG1 531 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 H0YCG3 227 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 KPNA3O00505 521 aaPredicted RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 POLR1CO15160 346 aaPredicted RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 CLIC2O15247 247 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 RAD51BO15315 384 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 NEMFO60524 1076 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TBL1XO60907 577 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ZWINTO95229 277 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 IL18RAPO95256 599 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ADRB2P07550 413 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 SRPRAP08240 638 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 RBP3P10745 1247 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 RBMXP38159 391 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 CCT6AP40227 531 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 PBX1P40424 430 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms