RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ANKS3Q6ZW76 656 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 CHST9Q7L1S5 443 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 OR2T11Q8NH01 316 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 TMIGD2Q96BF3 282 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 GLT1D1Q96MS3 346 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 MARCH5Q9NX47 278 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 ANAPC2Q9UJX6 822 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 PCDHB7Q9Y5E2 793 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 KLHL33A6NCF5 533 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 E5RI56 91 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 CBX4O00257 560 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 SYNCRIPO60506 623 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 MTHFD1P11586 935 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 FUT11Q495W5 492 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 ZRANB3Q5FWF4 1079 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 HID1Q8IV36 788 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 STK40Q8N2I9 435 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 DPP10Q8N608 796 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 FNDC5Q8NAU1 212 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 PDZD8Q8NEN9 1154 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 SMIM14Q96QK8 99 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 LRRC3Q9BY71 257 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 SLAMF8Q9P0V8 285 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 TNPO3Q9Y5L0 923 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 CROCCQ5TZA2 2017 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 BRCA2P51587 3418 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 A0A1B0GVM2 712 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 OR4F21O95013 312 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 ESRRGP62508 458 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 HECTD3Q5T447 861 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 SCIMPQ6UWF3 145 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 CDYL2Q8N8U2 506 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 OVCA2Q8WZ82 227 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 SEPT8Q92599 483 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 ESAMQ96AP7 390 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 PLD4Q96BZ4 506 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 CASD1Q96PB1 797 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 TRIM8Q9BZR9 551 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 CWH43Q9H720 699 aa15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 EIF2B4Q9UI10 523 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-202ENST00000535997 TMEM88BA6NKF7 163 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 SNAP91O60641 907 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 GJB5O95377 273 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 KLKB1P03952 638 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 IL12AP29459 219 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 TM4SF4P48230 202 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC11A1P49279 550 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 BIRC2Q13490 618 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 PCBP2Q15366 365 aaKnown RBP eCLIP15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 LPCAT2Q7L5N7 544 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ZFAND4Q86XD8 727 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CPNE9Q8IYJ1 553 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF786Q8N393 782 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CHCHD4Q8N4Q1 142 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 C1orf50Q9BV19 199 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 OCEL1Q9H607 264 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 BPIFA1Q9NP55 256 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 NUDT4Q9NZJ9 180 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF840PA6NDX5 716 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 GOLGA8CPA6NN73 597 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 IFRD1O00458 451 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 C1RP00736 705 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CDK4P11802 303 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CASP2P42575 452 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CLCN7P51798 805 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 CDH15P55291 814 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ERVPABLB-1P60509 514 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 TIGD2Q4W5G0 525 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 LRRC23Q53EV4 343 aaPredicted RBP15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ADGRF1Q5T601 910 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 TTC30BQ8N4P2 665 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 EFHBQ8N7U6 833 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 OR52B6Q8NGF0 335 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 METTL6Q8TCB7 284 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ISG20Q96AZ6 181 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 TMEM74Q96NL1 305 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 TTPALQ9BTX7 342 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 HEBP1Q9NRV9 189 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 HSFX1Q9UBD0 423 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 DHRS7Q9Y394 339 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ASB1Q9Y576 335 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ST14Q9Y5Y6 855 aa15.84■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF701M0R085 212 aaPredicted RBP15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 ARNTLO00327 626 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 LDLRP01130 860 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 NCK1P16333 377 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 TUFMP49411 452 aaKnown RBP15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 ZBED5Q49AG3 693 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 TAS2R42Q7RTR8 314 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 DHRSXQ8N5I4 330 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 BIRC7Q96CA5 298 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 PLEKHG4BQ96PX9 1271 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 BDH2Q9BUT1 245 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 P2RY12Q9H244 342 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 RPF2Q9H7B2 306 aaKnown RBP15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 INTS7Q9NVH2 962 aaKnown RBP15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 SMPD3Q9NY59 655 aaPredicted RBP15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF639Q9UID6 485 aa15.83■□□□□ 0.13
CHMP1A-202ENST00000535997 CLOCKO15516 846 aa15.83■□□□□ 0.12
CHMP1A-202ENST00000535997 COCHO43405 550 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms