RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 K7EM74 188 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DNAJB5O75953 348 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PROSCO94903 275 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MMP2P08253 660 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ARSEP51690 589 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IFI35P80217 286 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CDK18Q07002 472 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PPIDQ08752 370 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZBTB17Q13105 803 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IHHQ14623 411 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 AGAP9Q5VTM2 703 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ALKBH5Q6P6C2 394 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ABRAXAS1Q6UWZ7 409 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TMEM135Q86UB9 458 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BPHLQ86WA6 291 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GALNT11Q8NCW6 608 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KLHL6Q8WZ60 621 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SYN2Q92777 582 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 AGAP3Q96P47 875 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC25A23Q9BV35 468 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CEP41Q9BYV8 373 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC40A1Q9NP59 571 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MAP10Q9P2G4 905 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SPENQ96T58 3664 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LRRD1A4D1F6 860 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ARGFXA6NJG6 315 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 APOL1O14791 398 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KCNJ13O60928 360 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 XRCC4Q13426 336 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PDK1Q15118 436 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TMTC4Q5T4D3 741 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 WASH2PQ6VEQ5 465 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TMC3Q7Z5M5 1100 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 AMZ2Q86W34 360 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TMEM126BQ8IUX1 230 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 MR1Q95460 341 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZNF514Q96K75 400 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 NAP1L5Q96NT1 182 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FCRL4Q96PJ5 515 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 VPS35Q96QK1 796 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RAB33BQ9H082 229 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FANCEQ9HB96 536 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 WASH6PQ9NQA3 447 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SOHLH2Q9NX45 425 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 UVRAGQ9P2Y5 699 aa12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PLEKHB1Q9UF11 243 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-207ENST00000535958 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 A0A087X0T9 212 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SCRG1O75711 98 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TIAF1O95411 115 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 H2AFZP0C0S5 128 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FAM228BP0C875 321 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 EBLN1P0CF75 366 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BRAFP15056 766 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BPIP17213 487 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GNLYP22749 145 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FECHP22830 423 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PTPN4P29074 926 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 UQCRFS1P47985 274 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZBED6P86452 979 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TMEM115Q12893 351 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KCNAB1Q14722 419 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 UGT8Q16880 541 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CAPRIN2Q6IMN6 1127 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PWWP2BQ6NUJ5 590 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 H2AFVQ71UI9 128 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 OOSP2Q86WS3 158 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KMT5CQ86Y97 462 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PQLC3Q8N755 202 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 EID2BQ96D98 161 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 RNF157Q96PX1 679 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 CD180Q99467 661 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SLC25A51Q9H1U9 297 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FGF21Q9NSA1 209 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IMP3Q9NV31 184 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PSMD13Q9UNM6 376 aa12.71□□□□□ -0.37
TNFRSF1A-207ENST00000535958 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms