RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SARS2Q9NP81 518 aaKnown RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
ATL3-202ENST00000535789 ZNF624Q9P2J8 865 aaPredicted RBP16.13■□□□□ 0.17
ATL3-202ENST00000535789 WDR37Q9Y2I8 494 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 PKP3Q9Y446 797 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 LOXL2Q9Y4K0 774 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
ATL3-202ENST00000535789 OR2AG2A6NM03 316 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 SRP72O76094 671 aaKnown RBP16.12■□□□□ 0.17
ATL3-202ENST00000535789 AP2A1O95782 977 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 ITGA2BP08514 1039 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 THRAP10827 490 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 TPH1P17752 444 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 MPSTP25325 297 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 TNNT3P45378 269 aaPredicted RBP16.12■□□□□ 0.17
ATL3-202ENST00000535789 ABCG1P45844 678 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 ARSDP51689 593 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 TMPRSS15P98073 1019 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 NFATC2Q13469 925 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 P3H1Q32P28 736 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 ZDHHC20Q5W0Z9 365 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 TRAPPC5Q8IUR0 188 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 FBXO39Q8N4B4 442 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 BEND7Q8N7W2 519 aaPredicted RBP16.12■□□□□ 0.17
ATL3-202ENST00000535789 GDAP1Q8TB36 358 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 DNAJC1Q96KC8 554 aaKnown RBP16.12■□□□□ 0.17
ATL3-202ENST00000535789 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 TBC1D10AQ9BXI6 508 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 KCNK4Q9NYG8 393 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 OGFRQ9NZT2 677 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 CPNE7Q9UBL6 633 aa16.12■□□□□ 0.17
ATL3-202ENST00000535789 KALRNO60229 2985 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 OR52A4PA6NMU1 304 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 PPFIA2O75334 1257 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 RPL10P27635 214 aaKnown RBP16.11■□□□□ 0.17
ATL3-202ENST00000535789 SLC19A1P41440 591 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 GRIA1P42261 906 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 CDKN1CP49918 316 aaPredicted RBP16.11■□□□□ 0.17
ATL3-202ENST00000535789 LIMK2P53671 638 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 DRG2P55039 364 aaKnown RBP16.11■□□□□ 0.17
ATL3-202ENST00000535789 EIF3IQ13347 325 aaKnown RBP16.11■□□□□ 0.17
ATL3-202ENST00000535789 SQSTM1Q13501 440 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 SNX1Q13596 522 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 ITGA9Q13797 1035 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 CLCA4Q14CN2 919 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 LDLRAP1Q5SW96 308 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 PHF19Q5T6S3 580 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 PDZD3Q86UT5 571 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 PIM3Q86V86 326 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 ZNF248Q8NDW4 579 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 GPR150Q8NGU9 434 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 ZNF398Q8TD17 642 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 FAM96AQ9H5X1 160 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 LRRC40Q9H9A6 602 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 THSD1Q9NS62 852 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 PISDQ9UG56 409 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
ATL3-202ENST00000535789 BSNQ9UPA5 3926 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 KIR2DS5A0A0G2JLQ3 304 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 A0A0G2JNG1 304 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 C2orf81A6NN90 581 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 C9orf172C9J069 976 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 KIR2DS3K7RE56 304 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 CES2O00748 559 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 ZNF189O75820 626 aaPredicted RBP16.1■□□□□ 0.17
ATL3-202ENST00000535789 ZSCAN5DPP0CG00 497 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 CCL4P13236 92 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 TCP1P17987 556 aaKnown RBP16.1■□□□□ 0.17
ATL3-202ENST00000535789 CXCR5P32302 372 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 DMPKQ09013 629 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 NFE2L1Q14494 772 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 POU6F1Q14863 301 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 KIR2DS5Q14953 304 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 ABRAXAS1Q6UWZ7 409 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 OR4D9Q8NGE8 314 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 OR52K1Q8NGK4 314 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 PPP1R2P1Q96PQ5 205 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 STRADBQ9C0K7 418 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 PRORYQ9H606 182 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 ASB8Q9H765 288 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 ETNK1Q9HBU6 452 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 FOXJ2Q9P0K8 574 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 SAR1BQ9Y6B6 198 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 SLC30A1Q9Y6M5 507 aa16.1■□□□□ 0.17
ATL3-202ENST00000535789 TRBV5-4A0A0C4DH59 114 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 CCDC78A2IDD5 438 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 LILRA5A6NI73 299 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 PRAMEF10O60809 474 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 XRCC1P18887 633 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 PSMA3P25788 255 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 RBMS1P29558 406 aaKnown RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 PBLDP30039 288 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 SLC5A2P31639 672 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 MLLT3P42568 568 aaPredicted RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 GPLD1P80108 840 aa16.09■□□□□ 0.17
ATL3-202ENST00000535789 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
ATL3-202ENST00000535789 CLN3Q13286 438 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms