RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CBSLP0DN79 551 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 LAMP2P13473 410 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PRF1P14222 555 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 HOXB2P14652 356 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 IL9P15248 144 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 RYKP34925 604 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CBSP35520 551 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PPARGP37231 505 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NBL1P41271 181 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NR4A2P43354 598 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 RFX2P48378 723 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SLC18A2Q05940 514 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NIPAL4Q0D2K0 466 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CSTF3Q12996 717 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE1Q13065 139 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GAGE4Q13068 117 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 KRT32Q14532 448 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 RNPS1Q15287 305 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 DUSP6Q16828 381 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SLC9B1Q4ZJI4 515 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PPP6R3Q5H9R7 873 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SPATA1Q5VX52 437 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NAPEPLDQ6IQ20 393 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 FAM180BQ6P0A1 224 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NCEH1Q6PIU2 408 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 FAM43BQ6ZT52 329 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM179Q6ZVK1 233 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 LINGO2Q7L985 606 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CACNA2D4Q7Z3S7 1137 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 DEFB128Q7Z7B8 93 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 C7orf57Q8NEG2 295 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GJC3Q8NFK1 279 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 GTF3C6Q969F1 213 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 EME1Q96AY2 570 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MTBPQ96DY7 904 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PGAM5Q96HS1 289 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 LRFN5Q96NI6 719 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 NEUROD6Q96NK8 337 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CLSTN3Q9BQT9 956 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MXRA8Q9BRK3 442 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 STRA6Q9BX79 667 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MAK16Q9BXY0 300 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SLC25A18Q9H1K4 315 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MUC13Q9H3R2 512 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 CXorf56Q9H5V9 222 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 KAT14Q9H8E8 782 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 SIRT3Q9NTG7 399 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 ZHX1Q9UKY1 873 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-202ENST00000535689 KCNE2Q9Y6J6 123 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 MAU2Q9Y6X3 613 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 PTPRCP08575 1304 aa3.35□□□□□ -1.87
SNHG1-202ENST00000535689 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MICAL3Q7RTP6 2002 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TECTAO75443 2155 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM272A0A1B0GTI8 110 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 GOLGA6L9A6NEM1 432 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 PRR23AA6NEV1 266 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 B4DGG1 531 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 K7ENM7 598 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ADAM10O14672 748 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 WNT9BO14905 357 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ATP2A1O14983 1001 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TNFSF14O43557 240 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 SPRY3O43610 288 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 LIASO43766 372 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 SERPINI2O75830 405 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 GJB5O95377 273 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 SNAI1O95863 264 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 HIST1H2ABP04908 130 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 PRSS2P07478 247 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 IQCF3P0C7M6 154 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ATP1A3P13637 1013 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MYOGP15173 224 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 HIST1H2ADP20671 130 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TTKP33981 857 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MLH1P40692 756 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 PRCPP42785 496 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 LMAN1P49257 510 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 HARS2P49590 506 aaKnown RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF81P51508 661 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 CLCN5P51795 746 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 NUDT6P53370 316 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 POLGP54098 1239 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 RPS3AP61247 264 aaKnown RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TIMM10P62072 90 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 GPM6BQ13491 265 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TDGQ13569 410 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 NAB2Q15742 525 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ZSCAN23Q3MJ62 389 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ZKSCAN2Q63HK3 967 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 C11orf87Q6NUJ2 197 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 TSSK4Q6SA08 328 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 KRBA2Q6ZNG9 492 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 Q6ZTK2 550 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 MOB3CQ70IA8 216 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 H1FNTQ75WM6 255 aaPredicted RBP3.34□□□□□ -1.87
SNHG1-202ENST00000535689 HIST3H2AQ7L7L0 130 aa3.34□□□□□ -1.87
SNHG1-202ENST00000535689 ARHGAP12Q8IWW6 846 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms