RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 D2HGDHQ8N465 521 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 GALNT11Q8NCW6 608 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 DDHD1Q8NEL9 900 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 RAPGEF5Q92565 580 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF514Q96K75 400 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 TEKT5Q96M29 485 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF830Q96NB3 372 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 DNAJC7Q99615 494 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 SPATA16Q9BXB7 569 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 LHX9Q9NQ69 397 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 HACD3Q9P035 362 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 CROTQ9UKG9 612 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF711Q9Y462 761 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF106Q9H2Y7 1883 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 SHANK1Q9Y566 2161 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 A8MU76 341 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 MTSS1O43312 755 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 RFPL1O75677 317 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 NDUFA10O95299 355 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 TMEM253P0C7T8 217 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 CCNYL3P0C7X3 344 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 VCLP18206 1134 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 DLSTP36957 453 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 TMEM115Q12893 351 aaPredicted RBP11□□□□□ -0.65
CLSTN3-206ENST00000535668 PRKD1Q15139 912 aaPredicted RBP11□□□□□ -0.65
CLSTN3-206ENST00000535668 UGT8Q16880 541 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 KHDC1Q4VXA5 237 aaKnown RBP11□□□□□ -0.65
CLSTN3-206ENST00000535668 SNAP47Q5SQN1 464 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 ZFYVE27Q5T4F4 411 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 IZUMO3Q5VZ72 239 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 METRNLQ641Q3 311 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
CLSTN3-206ENST00000535668 KDELC2Q7Z4H8 507 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 RSC1A1Q92681 617 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 LINC00615Q96LM1 132 aaPredicted RBP11□□□□□ -0.65
CLSTN3-206ENST00000535668 OR6C1Q96RD1 312 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 VAT1Q99536 393 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 SYTL2Q9HCH5 934 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 PDE7BQ9NP56 450 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 IL26Q9NPH9 171 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 IL17CQ9P0M4 197 aa11□□□□□ -0.65
CLSTN3-206ENST00000535668 AGRPO00253 132 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 PPP1R12AO14974 1030 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SNX2O60749 519 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 KIAA0754O94854 1291 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SERPINC1P01008 464 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 FURINP09958 794 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 AMD1P17707 334 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SLC1A1P43005 524 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 LEPRP48357 1165 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TUBB4BP68371 445 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SH3BP2P78314 561 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 FANCCQ00597 558 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 ACY1Q03154 408 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 DNASE1L3Q13609 305 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TUBB2AQ13885 445 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 IGFBP7Q16270 282 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 ATP13A5Q4VNC0 1218 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 LDLRAP1Q5SW96 308 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SYVN1Q86TM6 617 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TTC30BQ8N4P2 665 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 BEND7Q8N7W2 519 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 GALNT6Q8NCL4 622 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 CCNYQ8ND76 341 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 ADAMTS17Q8TE56 1095 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 CTNNBL1Q8WYA6 563 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TUBB2BQ9BVA1 445 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 ZCCHC2Q9C0B9 1178 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TWSG1Q9GZX9 223 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 GLOD4Q9HC38 313 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF71Q9NQZ8 489 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 CTTNBP2NLQ9P2B4 639 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TLK1Q9UKI8 766 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 BTRCQ9Y297 605 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 TP53TG5Q9Y2B4 290 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 WDR37Q9Y2I8 494 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 SPTBP11277 2137 aa10.99□□□□□ -0.65
CLSTN3-206ENST00000535668 IGHV5-51A0A0C4DH38 117 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 TLCD2A6NGC4 264 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 GAPDHSO14556 408 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 KIF1CO43896 1103 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 SORBS2O94875 1100 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 RAB40ALP0C0E4 278 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 PRKAR1AP10644 381 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 PTPN4P29074 926 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 HADHBP55084 474 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 UBASH3AP57075 661 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 HSD11B2P80365 405 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 FOXM1Q08050 763 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 WASHC5Q12768 1159 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 GALNT3Q14435 633 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 RPE65Q16518 533 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 INSCQ1MX18 579 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 CACHD1Q5VU97 1274 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 PWWP2BQ6NUJ5 590 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 KDELC1Q6UW63 502 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 ASB18Q6ZVZ8 466 aa10.98□□□□□ -0.65
CLSTN3-206ENST00000535668 AMZ2Q86W34 360 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms