RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 NDUFS3O75489 264 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 BMP10O95393 424 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ODC1P11926 461 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 OPRL1P41146 370 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 SGSHP51688 502 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ERVPABLB-1P60509 514 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ATP6V0D1P61421 351 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 RPL38P63173 70 aaKnown RBP13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ZXDBP98169 803 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 LRRC73Q5JTD7 316 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 SFRP1Q8N474 314 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 TSPAN17Q96FV3 270 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 C9orf16Q9BUW7 83 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 HERC2P3Q9BVR0 1158 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CRISPLD1Q9H336 500 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 HACD3Q9P035 362 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ACTR3BQ9P1U1 418 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 PCDHB3Q9Y5E6 796 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 TCRBV5S2A0A599 114 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CACNG3O60359 315 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 RASAL1O95294 804 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CAPNS1P04632 268 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 IDUAP35475 653 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 HSPA7P48741 367 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 RENBPP51606 427 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 NKX2-5P52952 324 aaPredicted RBP13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ATP6AP1LQ52LC2 224 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 XKR4Q5GH76 650 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 DSG4Q86SJ6 1040 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 METTL23Q86XA0 190 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 PROKR1Q8TCW9 393 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 FUBP1Q96AE4 644 aaKnown RBP13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 NSMCE2Q96MF7 247 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 ARMC1Q9NVT9 282 aa13.75□□□□□ -0.21
LPCAT3-203ENST00000535479 RAMP2O60895 175 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PRSS23O95084 383 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ALPIP09923 528 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC2A4P14672 509 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PFKLP17858 780 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FDXRP22570 491 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 EPHA2P29317 976 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 NUP107P57740 925 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ABRAXAS2Q15018 415 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FSCN1Q16658 493 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 LGI2Q8N0V4 545 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PGAP3Q96FM1 320 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 CCDC138Q96M89 665 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 BOCQ9BWV1 1114 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SDR39U1Q9NRG7 319 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 RASSF1Q9NS23 344 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 GKN1Q9NS71 199 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ABCC13Q9NSE7 274 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC22A2O15244 555 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 E2F6O75461 281 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 RPL17P18621 184 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PLA2G16P53816 162 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 VBP1P61758 197 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 C6orf136Q5SQH8 315 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ANKS6Q68DC2 871 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 DCDC5Q6ZRR9 648 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 Q6ZSR9 355 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 GLT6D1Q7Z4J2 308 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ITFG1Q8TB96 612 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SLC52A3Q9NQ40 469 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PKD2L2Q9NZM6 624 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SUN2Q9UH99 717 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FUOMA2VDF0 154 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 M0QZ92 97 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 GSTA4O15217 222 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 NBNO60934 754 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ZNF189O75820 626 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FTH1P02794 183 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 NEK2P51955 445 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 ADAM17P78536 824 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 TAF10Q12962 218 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 LCP2Q13094 533 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 MANEALQ5VSG8 457 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 Q8N9G6 341 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 FAR2Q96K12 515 aa13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
LPCAT3-203ENST00000535479 BEGAINQ9BUH8 593 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms