RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NUDT21O43809 227 aaKnown RBP22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 RALBP11234 206 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 ATP1B2P14415 290 aaPredicted RBP22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 PNLIPP16233 465 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 NMBRP28336 390 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 MAGEA3P43357 314 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 FNBP1LQ5T0N5 605 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 ARMC3Q5W041 872 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 IYDQ6PHW0 289 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 CCNI2Q6ZMN8 369 aaPredicted RBP22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 ZNF438Q7Z4V0 828 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 SFRP1Q8N474 314 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 SPATA4Q8NEY3 305 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 SLC37A2Q8TED4 501 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 KRT12Q99456 494 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 OSGEPL1Q9H4B0 414 aa22.36■■□□□ 1.17
SFSWAP-204ENST00000535399 PLXNB3Q9ULL4 1909 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 TRBV23OR9-2A0A075B6M9 112 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 FAM149AA5PLN7 773 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 CFAP99D6REC4 459 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 TTI1O43156 1089 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 KCNJ13O60928 360 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 MT-CO3P00414 261 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 F3P13726 295 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 PRAMEP78395 509 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 DMPKQ09013 629 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 DHX34Q14147 1143 aaKnown RBP22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 AMZ2Q86W34 360 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 BEND7Q8N7W2 519 aaPredicted RBP22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 OR6P1Q8NGX9 317 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 OR4L1Q8NH43 312 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 TRIM44Q96DX7 344 aaPredicted RBP22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 MFSD3Q96ES6 412 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 LINC00615Q96LM1 132 aaPredicted RBP22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 TRIM51Q9BSJ1 452 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 ABCG4Q9H172 646 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 MSRB2Q9Y3D2 182 aa22.35■■□□□ 1.17
SFSWAP-204ENST00000535399 SDR42E2A6NKP2 422 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 PPM1DO15297 605 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 VCLP18206 1134 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 ARNTP27540 789 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 PRLHRP49683 370 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 ITIH4Q14624 930 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 IZUMO3Q5VZ72 239 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 CES3Q6UWW8 571 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 WASH2PQ6VEQ5 465 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 FAM83HQ6ZRV2 1179 aaPredicted RBP22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 CACTIN-AS1Q8N1I8 211 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 AGGF1Q8N302 714 aaeCLIP22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 DCBLD1Q8N8Z6 715 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 WASH6PQ9NQA3 447 aa22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 SCHIP1Q9P0W5 487 aaPredicted RBP22.34■■□□□ 1.17
SFSWAP-204ENST00000535399 KNTC1P50748 2209 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 MGAT4DA6NG13 374 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 RHPN2P1A8MT19 583 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 NTN3O00634 580 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 JUPP14923 745 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 BRAFP15056 766 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 PBLDP30039 288 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 FASLGP48023 281 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 CCL7P80098 99 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 SEMA3AQ14563 771 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 NR1D2Q14995 579 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 AGAP9Q5VTM2 703 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 ABRAXAS1Q6UWZ7 409 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 XKR5Q6UX68 686 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 PACS1Q6VY07 963 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 ZNF572Q7Z3I7 529 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 SPRED1Q7Z699 444 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 PCGF5Q86SE9 256 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 HOOK3Q86VS8 718 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 CCNJLQ8IV13 435 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 Q8N9G6 341 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 TRIM56Q9BRZ2 755 aaKnown RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 MARCH4Q9P2E8 410 aaPredicted RBP22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 CLCA2Q9UQC9 943 aa22.33■■□□□ 1.17
SFSWAP-204ENST00000535399 RP1P56715 2156 aa22.33■■□□□ 1.16
SFSWAP-204ENST00000535399 KIR2DS5A0A0G2JLQ3 304 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 A0A0G2JNG1 304 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 A0A1W2PQM1 296 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 OR5K4A6NMS3 321 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 KIR2DS3K7RE56 304 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 SLC2A4P14672 509 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 IDSP22304 550 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 C2orf54Q08AI8 447 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 TARDBPQ13148 414 aaKnown RBP eCLIP22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 NFE2L1Q14494 772 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 KIR2DS5Q14953 304 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 SEPT7Q16181 437 aaKnown RBP22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 FASTKD1Q53R41 847 aaKnown RBP22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 LYPLAL1Q5VWZ2 237 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 CASC4Q6P4E1 433 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 CERS6Q6ZMG9 384 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 CLDN19Q8N6F1 224 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 OR2L2Q8NH16 312 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 WDR48Q8TAF3 677 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 SIGLEC10Q96LC7 697 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 LRRN3Q9H3W5 708 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms