RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MYOCQ99972 504 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 UGT2B28Q9BY64 529 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 TRIM54Q9BYV2 358 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 ADAMTS10Q9H324 1103 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 RERGLQ9H628 205 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 HS3ST4Q9Y661 456 aa15.75■□□□□ 0.11
MCF2L-232ENST00000535094 CBX4O00257 560 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 TLR5O60602 858 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 FAM20BO75063 409 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 CNMDO75829 334 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ALOX12P18054 663 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 EFNA1P20827 205 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 LEPRP48357 1165 aaKnown RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 POLD2P49005 469 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 SPCS2Q15005 226 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 SYT16Q17RD7 645 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 LCN8Q6JVE9 175 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 TMEM53Q6P2H8 277 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ENPP6Q6UWR7 440 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 MINDY1Q8N5J2 469 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 MFSD2AQ8NA29 543 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 OR52B6Q8NGF0 335 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ZNF420Q8TAQ5 688 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 MCOLN3Q8TDD5 553 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 IRGQQ8WZA9 623 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 KCNN1Q92952 543 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 NDEL1Q9GZM8 345 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 LTBP1Q14766 1721 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 PTGESO14684 152 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 SLC7A4O43246 635 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 NDUFS2O75306 463 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ACVRL1P37023 503 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 TRIM32Q13049 653 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 FAM174BQ3ZCQ3 159 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 NANOGNBQ7Z5D8 188 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 RTL3Q8N8U3 475 aaKnown RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ASB2Q96Q27 587 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 LRRC3Q9BY71 257 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 TUBB1Q9H4B7 451 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 PRDM8Q9NQV8 689 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 VPS4AQ9UN37 437 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ST3GAL5Q9UNP4 418 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 MICAL3Q7RTP6 2002 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 DFNA5O60443 496 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ANGPTL1O95841 491 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 MADCAM1Q13477 382 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 DDX39BQ13838 428 aaKnown RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 PTGR1Q14914 329 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 C18orf21Q32NC0 220 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 TLK2Q86UE8 772 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 OR13J1Q8NGT2 312 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 FRS2Q8WU20 508 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 PTCD2Q8WV60 388 aaKnown RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 NT5C3BQ969T7 300 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 ASPSCR1Q9BZE9 553 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 PCDHGA8Q9Y5G5 932 aa15.74■□□□□ 0.11
MCF2L-232ENST00000535094 GPC6Q9Y625 555 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-232ENST00000535094 DNAH12Q6ZR08 3092 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 KRBA1A5PL33 1030 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 PDHXO00330 501 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 MBL2P11226 248 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 IL2P60568 153 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 CDC42EP1Q00587 391 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SLC13A2Q13183 592 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SELPLGQ14242 412 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SYVN1Q86TM6 617 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 DTWD1Q8N5C7 304 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 POLR1EQ9GZS1 481 aaKnown RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 TREX1Q9NSU2 369 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 MIOSQ9NXC5 875 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 WWOXQ9NZC7 414 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 TMA7Q9Y2S6 64 aaKnown RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 PCDHGC4Q9Y5F7 938 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 C17orf102A2RUQ5 167 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 FXYD1O00168 92 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 HSD17B1P14061 328 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 GRK4P32298 578 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 CA8P35219 290 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 PGFP49763 221 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 CDKN1CP49918 316 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 P3H2Q8IVL5 708 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 FAM124BQ9H5Z6 455 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 GNPTGQ9UJJ9 305 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 ABCB7O75027 752 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 BCAS1O75363 584 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 GDF5P43026 501 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SCAPQ12770 1279 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SEMA3BQ13214 749 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 DGUOKQ16854 277 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 SULT1C3Q6IMI6 304 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 HID1Q8IV36 788 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 PNPT1Q8TCS8 783 aaKnown RBP15.73■□□□□ 0.11
MCF2L-232ENST00000535094 PPP1R2P1Q96PQ5 205 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 IL12RB2Q99665 862 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 FAM105AQ9NUU6 356 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 GIN1Q9NXP7 522 aa15.73■□□□□ 0.11
MCF2L-232ENST00000535094 MAGEL2Q9UJ55 1249 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms